Shewanella algae: BS332_17495
Help
Entry
BS332_17495 CDS
T05622
Name
(GenBank) phosphomethylpyrimidine synthase ThiC
KO
K03147
phosphomethylpyrimidine synthase [EC:
4.1.99.17
]
Organism
salg
Shewanella algae
Pathway
salg00730
Thiamine metabolism
salg01100
Metabolic pathways
salg01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
salg00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
BS332_17495
Enzymes [BR:
salg01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.17 phosphomethylpyrimidine synthase
BS332_17495
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiC_Rad_SAM
ThiC-associated
Motif
Other DBs
NCBI-ProteinID:
AXQ15781
LinkDB
All DBs
Position
3869677..3871767
Genome browser
AA seq
696 aa
AA seq
DB search
MSNRQSNRRQTREAAQAFIDNLKPLQHPNSQKLFVQGSRADIQVAMRQIRQTDTRIPTQD
GSEQFEPNPAVRVYDCAGPYSDPNAAINVRQGLDKLRQGWILERDDTQELTSVSSSFTQQ
RLADEGLDHLRFDALPKPRRAKPGKRVTQLHYARAGIITPEMEYIAIRENMARANEALAK
DPQLARKAKGEAFGAIVATPITPEFVRSEVARGRAIIPANINHPEAEPMIIGRNFLVKVN
ANIGNSAVTSSIEEEVEKLVWATRWGADTVMDLSTGRYIHETREWIVRNSPVPIGTVPIY
QALEKVNGIAEDLSWEVFRDTLIEQAEQGVDYFTIHAGVLLRYVPMTANRVTGMVSRGGS
IMAKWCLSHHKENFLYSHFRDICELCAAYDVSLSLGDGMRPGSIADANDEAQFAELETLG
ELVKIAWEYDVQTIIEGPGHIPMQLIKENMDKQLEYCDEAPFYTLGPQTTDIAPGYDHFT
SGIGAAMIAWYGCAMLCYVTPKEHLGLPNKEDVKQGLIAYKIAAHAADVAKGHPGAQLRD
NALSKARFEFRWEDQYNLGLDPDTARAFHDESLPQESAKVAHFCSMCGPKFCSMKITQDV
RDYAASLVTSQVASGDSSGPDSAERQTEPVQAEELMAQPLEVLDAEAGMARMSAQFKAGG
SALYHPATASEKSLSESNPKPKSKPEPEAARYEEEA
NT seq
2091 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaatcgtcaatccaatcgtcgtcaaacccgagaggccgcccaggcctttatcgat
aaccttaaacccttgcagcatcccaattcacagaagctgttcgttcagggctcccgggcc
gatattcaggttgccatgcgccaaatcaggcagacagacacccgaataccaacccaagat
ggcagtgagcaatttgaacccaatcccgctgtacgtgtttatgattgtgccggcccttat
tcagatcccaacgcggctatcaatgtgcgccagggcctggataaactgcgccagggctgg
atcctagagcgtgatgatacgcaagagctgacttcggtcagctccagttttacccagcag
aggctggcggatgaagggctggatcatctgagattcgacgctttgcccaaaccgcgccgg
gccaagccgggtaagcgggtgacccaattgcattacgcccgcgccggtattatcactcct
gaaatggaatatatcgccattcgtgaaaatatggcccgggccaacgaagcgcttgccaaa
gatccgcagctggcccgcaaggccaaaggagaagcctttggcgctatagttgccacgccg
ataacccctgagtttgttcgcagcgaagtggcccgtggccgcgccatcattcctgccaac
atcaaccatccggaagccgagcctatgattatcggccgtaactttttggtgaaggttaac
gccaatatcggcaattcggcggtgacctcttccatcgaggaagaggtggaaaaactggtg
tgggccacccgttggggcgccgatacggtaatggatctgtccaccggccgttatatccac
gaaacccgtgaatggatagtacgcaactcgcctgtgcccataggtaccgtgcccatctat
caggcgctggaaaaggtcaacggtattgccgaagatctcagctgggaagtgtttcgcgac
accctgatagagcaggccgaacaaggggtggattacttcaccattcatgccggggtattg
ctgcgctatgtgcccatgacggccaatcgggtgacaggtatggtatcccgcggcggctcc
attatggccaagtggtgcctgagccatcataaggaaaacttcctctacagccatttccgc
gacatctgtgagctttgcgccgcctatgatgtgtcactgtcgctcggtgacggcatgcgc
cccggctcgattgccgatgccaacgacgaggctcagtttgctgagctggaaaccttgggt
gagctggtgaaaatcgcctgggaatacgatgtgcagaccataatcgaagggccgggccat
attcctatgcagctgatcaaggagaatatggacaagcagcttgagtactgtgatgaggcc
cctttctacaccttggggccccagaccacggatattgcgcccgggtacgatcatttcacc
tctggcataggcgcggcgatgattgcctggtacggctgcgccatgctctgttatgtgact
cccaaggagcatctgggcttgccaaacaaagaggatgttaaacaagggcttattgcatac
aagattgcggcacatgccgccgatgtcgccaagggacatccaggcgcccagctgcgcgac
aatgcgttgtccaaggccagattcgagtttcgctgggaagatcaatacaacctggggttg
gatcccgataccgcccgggcgttccacgatgaatccctgcctcaggagtctgccaaggtg
gcgcatttttgctccatgtgcggccccaagttctgctcgatgaaaattacccaggatgta
cgcgactatgcagcgtctttggttacgtctcaggtggcttcgggggattcgtcagggcca
gactcggcagagcgccaaaccgagccagtgcaggcagaagaactgatggcacagccgctg
gaagtactggatgccgaggcggggatggcgcggatgtcggcgcagttcaaggccggtggc
agcgccctgtatcatccggctacagcaagcgaaaagtccttgtccgagtccaatcccaaa
cccaagtccaagcccgagccagaggctgcacgctatgaagaggaagcctga
DBGET
integrated database retrieval system
