Shewanella algae: BS332_20980
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Entry
BS332_20980 CDS
T05622
Name
(GenBank) lipid A export permease/ATP-binding protein MsbA
KO
K11085
ATP-binding cassette, subfamily B, bacterial MsbA [EC:
7.5.2.6
]
Organism
salg
Shewanella algae
Pathway
salg02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
salg00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
BS332_20980
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
salg02000
]
BS332_20980
Enzymes [BR:
salg01000
]
7. Translocases
7.5 Catalysing the translocation of carbohydrates and their derivatives
7.5.2 Linked to the hydrolysis of a nucleoside triphosphate
7.5.2.6 ABC-type lipid A-core oligosaccharide transporter
BS332_20980
Transporters [BR:
salg02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
BS332_20980
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
DEAD
AAA_22
AAA_29
ABC_ATPase
AAA_16
nSTAND3
RsgA_GTPase
G-alpha
NB-ARC
DUF4191
Motif
Other DBs
NCBI-ProteinID:
AXQ16322
LinkDB
All DBs
Position
complement(4620846..4622645)
Genome browser
AA seq
599 aa
AA seq
DB search
MSTSQQREVWTVFRRLLSYLKPLKGVFIISILALITYGVVDATFIAFVKPFIDEGFANNS
VVAGVELGTSKGFNASSDVLTMAPFVVVGLFSLRGLANFVSTYGISYISAKLIQDMRQQV
FEHILSLPVSYMDKENTGSLISKVTFDTEQIARASGSALITLVRDSVTVIGMLGLMFYYS
WKLSLCILIIGPFIGVVIAVVSRRFRKVSRQIQGAMGSVTAVTEQMIKGHKNVLSFGGQK
TEAERFAKVNDQNRYQNMKLAAAQAISQPLIMIIGSFALAFVLYAASFDSLKDELTAGTF
ATILGAMLAMLQPIKNLTRVNAEFQRGIAACTTVFELLDTPGESDSGTHTVERVEGNLRF
DNVSFGYPGQERLALENINFEVRQGQTLALVGRSGSGKSTIASLVTRFYAGLKQGEITLD
DVSIYDYSLKCLRSQVALVSQQVTLFNDTIANNIAYAYPGEATREQIENAAKLAYAMEFI
ETLPQGLDTEIGENGVMLSGGQRQRIAIARAILRDAPVLILDEATSALDTESEKAIQKGL
DNLRRNRTSIVIAHRLSTIESADQILVVDQGKILERGTHQSLLEKDGTYAKLYQMQFGG
NT seq
1800 nt
NT seq
+upstream
nt +downstream
nt
atgagcacatctcaacaacgtgaagtctggacggttttcagacgtttgctgtcctacctc
aagcctctcaaaggggtatttatcatctcgattctggcgttgatcacctatggggttgtg
gacgctacttttatcgcttttgtgaaaccttttattgatgaagggtttgccaataattcg
gtcgttgccggcgtggagctgggcacctccaaagggtttaatgccagctcggatgtgttg
accatggcccccttcgtggtagtggggctgttcagtcttaggggattggccaactttgtc
tctacctatggcatctcttatatcagtgccaagcttattcaggatatgcgtcagcaggtg
tttgaacacatactgtcgctgcctgtcagctatatggacaaggaaaacacgggttccttg
atctccaaagtaaccttcgacacagagcaaattgccagagcctccggcagcgcgctgatc
accttggtgagagacagtgtcactgtcatcggcatgctggggttgatgttctattactcc
tggaagctgtcgctttgcattctgatcattggtcctttcatcggggtggtgattgccgtt
gtcagtcgccgcttccgtaaggtatcgcggcagatccagggcgccatgggatcagtgact
gcagtgaccgagcagatgatcaagggccacaagaacgtgttgtctttcggcggtcagaag
actgaggccgagcgttttgccaaagttaacgatcaaaaccgctatcagaacatgaagttg
gcagcggcccaggccatcagccaaccgcttattatgatcataggttcctttgcattggcc
tttgtactctatgccgccagctttgacagcctgaaggatgaactgaccgcgggtaccttt
gccaccatcctgggtgccatgctcgccatgctgcagcccatcaagaacctcacccgggtt
aacgccgagtttcaacgcggtatcgcggcctgtaccacagtgtttgagttgctggatact
ccgggggagtccgatagcggcactcacacagtagagcgggttgagggtaatctgcgtttc
gataacgtcagctttggttatccggggcaggagcgtctggcgcttgagaatatcaacttt
gaagtgcgtcaggggcagactctggcgctggtgggtcgctcaggctcgggtaagtcgacc
atcgccagtctggtgacccgtttttacgctggactgaaacagggggagattaccctggat
gatgtcagtatttacgactattcactcaagtgtctgcgtagccaggtcgcgttggtgtcg
cagcaggtcactcttttcaacgacaccatagccaataatatcgcctatgcctatccaggc
gaggcgacccgcgaacagatagaaaacgccgccaaattggcctatgcgatggagtttatc
gaaaccttgccccaaggactggataccgagataggtgaaaacggcgtgatgttgtccggt
ggtcaacgccagcggatcgccattgccagagccatcctcagggatgcccctgtgttgatc
ctcgatgaagcgacctcggcactggataccgaatcagagaaggcgattcaaaaggggctg
gataacctgcgccgcaatcgtacctcgatagttattgcccacagactgtcgaccattgaa
agtgccgatcagattttggtggtcgatcagggcaagatcctcgagcgcggcacgcatcag
agcctgctggaaaaggatgggacgtacgccaagttgtaccagatgcaattcggaggttaa
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