Shewanella algae: BS332_21375
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Entry
BS332_21375 CDS
T05622
Name
(GenBank) hypothetical protein
KO
K13529
AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
salg
Shewanella algae
Pathway
salg03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
salg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
BS332_21375
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
salg03000
]
BS332_21375
03400 DNA repair and recombination proteins [BR:
salg03400
]
BS332_21375
Enzymes [BR:
salg01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
BS332_21375
Transcription factors [BR:
salg03000
]
Prokaryotic type
Helix-turn-helix
AraC family
BS332_21375
DNA repair and recombination proteins [BR:
salg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
BS332_21375
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AlkA_N
Ada_Zn_binding
HTH_18
HTH_AraC
HhH-GPD
Motif
Other DBs
NCBI-ProteinID:
AXQ16390
LinkDB
All DBs
Position
complement(4708204..4709817)
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AA seq
537 aa
AA seq
DB search
MMTIFTELSTDTCRRARLSRDPRFDGRFFIGVKTTGIYCRPICPAVAPKEENVDYFFSAA
AAANQGLRPCLRCRPESAPGSCAWKGTRTTLERAVTLIEQGALSGESAKGVEHLAQRLGI
SSRYLRKLFVEALGLSPKQYAAFQQLMFAKQLLHQTRLPITQVALAAGYTSIRRFNEVFQ
SQLQLTPSALRRSADTQMDNSNRLQLFLSYRPPYAWQALLDFYRLRAVTGMEWFELDGRQ
GYGRSLLLNSDKGGFKAWFFAELQASQNRVAVTLALEEGAELSLLPVLVNRIRRILDLDA
DMQQVEQVLQPITLADSTFGWEPGLRLPAAGSLFEAGVRAVLGQQVSVTQATKLLGQLVA
ARGERRVIAGREISFFPEPESMLAADFDELKMPASRKTALAELARFQLEHGDTEPEAWLS
LKGIGPWTIAYARMRGLSDPDVLLGGDLIIRKRLLTLLGKTAISTEVNGNLAQLNPDSAK
QGAVGQHKGNKSADKKSMDNKSDAKKSAAHYQALLQSVTEAASPWGSYLTLQLWQSA
NT seq
1614 nt
NT seq
+upstream
nt +downstream
nt
atgatgacgatttttaccgagctcagcaccgacacctgtcgccgggcgagacttagtcgc
gatcccaggtttgatggccgcttctttatcggggtgaagacgacggggatctattgccgg
cctatctgcccggcggtggcgccgaaagaggaaaatgtcgattactttttctcggccgcc
gccgcggcaaatcaaggtttgcgcccctgtttgcgttgccgaccggaaagtgcgcccggc
tcctgtgcctggaaaggcacgagaaccacgctggagcgggcggtaaccctgatagagcag
ggcgccttgagcggcgagtcggcgaaaggtgtcgagcacttggcacagcgcctcgggatc
agcagtcgttatctgcgcaagctgtttgtcgaagcgctgggcctgtctcccaagcaatac
gctgcgtttcagcaattgatgtttgccaagcagctgctgcaccaaacccggctccctatc
acgcaagtggccttggctgcgggatacacaagtattcgccgcttcaacgaagtgtttcag
agtcagctgcagcttaccccgtcggcgctcagacgtagcgctgatacgcaaatggacaac
agtaacaggttgcaactgtttttgagttaccggccgccatatgcctggcaagcgttgctt
gatttctatcgcctgcgggcggtaacaggaatggagtggtttgaacttgatggccgccag
ggctatggtcgcagcctgttactcaacagcgacaaaggcgggttcaaagcttggtttttt
gccgagttgcaggcctcgcaaaatagagtcgcagttaccctggcattggaagagggcgcc
gagcttagcttgttaccggtattggtcaatcggataagaaggatattggatctcgacgct
gatatgcagcaggttgagcaagtgttgcaacctatcacactggcagactccacctttggt
tgggagccggggctgaggctgccggcagcaggctctctgtttgaagctggtgtgcgggct
gttctgggccagcaggtcagcgttacccaagccacaaaactgttggggcagttggtggca
gccagaggtgagaggcgagttatcgccgggcgcgaaatcagcttctttcccgagcccgaa
agcatgttggcggcggactttgacgagttgaaaatgcccgcaagcagaaagacggcattg
gctgagttggcgcgttttcagcttgagcatggtgataccgagcccgaggcttggctcagt
ttgaaagggattggcccctggaccatagcctacgccagaatgcgcgggttgtcggatcct
gatgtgttgctcggcggcgacttgataatccgtaaacgtctgctcacgttgcttggtaaa
acggcaatctcgaccgaggttaacgggaacttggctcaactcaacccggattcggctaaa
caaggtgcagttggtcagcataaaggcaataaaagtgctgacaagaaaagtatggacaac
aagagtgacgccaagaaaagtgcggcccattaccaagcgttactgcaaagtgtcactgaa
gcggcgtcgccctggggcagttatcttactctacaactttggcagtcggcatag
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