Shewanella algae: BS332_22460
Help
Entry
BS332_22460 CDS
T05622
Name
(GenBank) hypothetical protein
KO
K20276
large repetitive protein
Organism
salg
Shewanella algae
Pathway
salg02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
salg00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
BS332_22460
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Big_3_3
DUF4165
Big_3_2
PKD
PKD_4
Motif
Other DBs
NCBI-ProteinID:
AXQ16917
LinkDB
All DBs
Position
unnamed:107862..113393
Genome browser
AA seq
1843 aa
AA seq
DB search
MINFKPKIPAMLGALAVLTAGAAHAELLEYTFKAPDGTQRSLTPNANYANPTGNISFALS
AGIDRKVKISVIRSDGTVVSTATSHLLGATDRITVGGKSYYGAELQLPAPSEGVYKLRAE
ILASDGSSVQTDEYPLQVDTTAPSLANVTVKGEWNRALSDGTLLRGPNRFSGIDVSASDA
GSSVSSIQAYAVDSKGKRSPVVSVNYANGQGQLLNWSTVFPNGEDLYTLHFEALDKAGNK
GSIAYPIAWDSVGAKSGENPEPVAVYDPKNPQASTFKVNGQALSGFAPYQNGMTIYSDTY
RVLYRIPKTNSYPSSPYGAQSGNWCDYKNCIEGNIIAEDGTYDYRQTQADVFQQHGTKTK
SFIIYDWVMNSLGNTSVSVKADPSVSLAPIGKYVEYLRDDGQWVRGETINMSSVNHYKKL
RFHVEPRPYAQELWGSWLPTTKIPANASYAEVDTDISFSGRSCSWPGYWSRPEGKPELPS
DRIGATFCYDLNPPEIAGLERNGRIFKAHFREPDSFDGWGVNQWVISNNSSASAITSTGE
ERPLSRTEVLRSSTNDWFFTFSAENLSEGTYTGISLVAKDAFGNEVKQVFTGSQYAMSID
NSAPTLTVSISDGAPIQSLDDVVITLTDTADPSPKLTSIALVGGPADDKVQLSWREESKG
RFRLEYPVMFPSLKEGESYTLTVSGEDAQGNAVQKAVGFEYKPRQVMLADGMDGKVMVPA
VTHEFVHADGKRIIETKPLTLSDGAVVTGSYDVFATLRSDAKVPLVVNGVRIEPGQTMGI
MSQHDFGASGGRLSIPVKPAVPDVVGSSSLLVMTSAPNSPILVVDINTWKGTAKLSAESW
TIRQVIDPVKIYALPESGVPCRFTTKEDVAMAADPIRDPVCLLQWDRTPDEAEQTTQDNN
GMKVAGLVGQAVSIGEQPVEYSLYLFSGDGSKVKVGSGSQNLTVTTAYGSVGYTPIDDIA
QVNRVIEDFDVNFKQSKGPDCSITLSADRAKNEAANKAVGSASRTCLFEWQQIPDGLVQD
PLSESPSLSGSLAENGDHPLGWRVSIFTRNGTRVTLNDETFNVEAVDPPAPTVELASDYN
FKDNIYLVPMTGNYLGDAIINSERADLDIAISRNSDVLESETFTPGWGATNKVYRRINTD
ERALWEETTYKVNAAYNKVPDVKTEVVYRAISAPSDSIRPIVEVKGDTAIDTQALPVRVL
IRDQYKPDGDYDANTMGVWKVRLIQQKAYNETVALTDYAEASNGEAQFSVDLSGVDTSSV
RIAAEAVLESPVEGYNRTELSIRPAFLTVLRGGAIGAGVEARKLSGEAPFTAVFKLSLDD
RQDLRATGQVVWETSKDDGKTWEQFIPEDRYKYQLVKTFDKGEYQVRAKVVNVNSGAEKY
TEAVSVVAYDKPDIAVIGPTTLFVGSEGKYTANLTLNDEPISGGNAIVEWSTDGGKTYAQ
TGDSITLSSDEETRYRLWARVRSATAPADDGYAYEVAKTAVDFRAVKAPRPYVTGPRVIE
TGKKYVFKAETSLPYRGMDVKLNGFFTLPDGSIVQGDTAEYVPSDTDLNQATVETKYTTW
IEGYRDQGAEASHSLRSRVWQYVWPSFGMQVRKNADVAPATITASVRPIAFNGKLEEPTY
EWELPEGAVIQDQRQDIVRSFVINEPGDYNIKVTVRDARGHETVIEQPLKIGQAEPYAID
LQYSGSNKYEREPLDVLLRPYISGGHPRDRISTRVYSVDGTPLESSGYYGRATLGAGEHS
IKLKITSEMGHEAEGEVNINVAENKLPACSLSSRETVGSWIVYANCEDTDGRMKSYEWTI
AGELQSISSDRVTISKGTYETMPTISLVGVDDSGGKSEAVTMN
NT seq
5532 nt
NT seq
+upstream
nt +downstream
nt
atgatcaatttcaagcctaaaattccggcgatgcttggggctctggcggttcttaccgct
ggtgctgctcatgcagagctgctggaatacacctttaaggctccagatggtacgcaacgg
tctctgactccgaatgccaactatgccaacccaacgggcaatatctcgtttgccttgagt
gccggtatcgaccgaaaggtaaagatttcggtgattcggtcggatggaacagtggtttcg
acagcgaccagccaccttcttggggctactgatcgcatcacagtgggtggaaaatcctac
tatggtgcggaacttcaactaccggctccttccgagggagtctacaaactaagggccgaa
atactggcgtcagacggaagttccgttcagactgatgaatacccgcttcaagtcgatacg
acagcgccaagtttggcaaacgtgacagtaaaaggggaatggaaccgggcgctttctgat
ggaacgctactgcgaggtcctaaccgattttcaggtatagatgtgtctgcatctgatgcc
ggttcttcggtttcctctatacaggcgtatgctgtagatagcaaaggcaagaggagtcct
gttgtctcggttaattacgccaacggccaaggccagttgttgaactggagcactgtgttc
cctaatggggaggatctatatacgcttcatttcgaggccctggataaagcagggaacaaa
gggtcaatagcctatcctattgcttgggattcagtaggtgcaaagtctggagagaatcct
gagccagtagcagtgtatgaccctaagaacccgcaggcctcaacttttaaggttaatggt
caggccctatcaggttttgcgccttatcagaacggaatgaccatttattccgatacctac
agggtgctctaccggatacccaaaacaaactcctatccttcttcaccttacggtgctcaa
agcggtaactggtgtgattataaaaactgtattgaaggcaatatcattgccgaagacggt
acatatgattatcggcagacgcaagctgatgtattccagcaacatgggacaaaaactaag
tcgtttattatttacgactgggttatgaactctcttggtaatacatccgtcagtgtgaaa
gctgatccatcggttagcttggctcccatcggtaagtatgttgaatatcttagggatgat
ggtcagtgggtccgcggtgaaaccattaatatgagctcagttaaccattataaaaaactg
agatttcatgttgagccgagaccttacgctcaggagttatggggatcttggttgcctact
actaaaattccggcaaatgcttcttatgcagaagtggatacggatatatcgttcagtggg
cgctcatgttcatggcctggatattggtctcgaccggaagggaagcctgaacttccgtct
gatcggattggggcaacgttctgctatgaccttaaccctcctgaaattgctgggttagaa
cgaaatgggcggatttttaaagctcatttccgtgagcctgattcatttgacggttggggt
gttaaccagtgggttatttctaacaactcaagtgcgtctgcgataacctcgactggcgaa
gaacgtccgttgtctcgtactgaagttcttcgtagtagcacaaatgattggtttttcaca
ttttctgctgagaatctgtcagagggcacatataccggcatatctctcgtagctaaagat
gctttcggtaatgaggttaagcaggtattcactggctcccaatatgctatgagcatagat
aattcagcgccgacactaaccgtatcgatcagtgatggagcaccaatccagtctttggat
gatgttgtaatcaccttgactgatactgccgacccgagtcctaagctgacctctattgcc
ctcgtcggaggcccagccgatgacaaggtgcagttgtcttggcgtgaggagtcgaaaggt
cgattccgccttgagtacccggtaatgttcccgtctttgaaggaaggggaatcttacacg
ctgactgtttccggtgaggacgcacaaggcaacgcggttcaaaaggcggttggcttcgag
tacaaaccgcgtcaggtgatgctggcggatgggatggatggcaaggttatggtccccgct
gtcactcatgaatttgttcatgcagatggcaagcggatcatcgagaccaagccgctgacg
ctcagtgatggtgctgtcgtgacaggttcatacgacgtgtttgcgaccctccgttctgat
gcgaaagtgccgctggtggtgaatggggtgcgtatcgagccgggccagacaatggggatc
atgagccaacatgatttcggtgcgtcaggtggtcgtttgagcattccggttaaaccggct
gttcctgatgtggtcggctcttccagtcttcttgtcatgacctccgcgccgaactcaccc
atcttggttgtggacatcaatacctggaaagggacggccaagctctcggctgaatcatgg
acaattcgccaggttattgacccggtgaaaatctatgccctgccagagtcgggtgtgcct
tgccggttcaccacgaaagaggatgtggctatggccgcagacccaattcgtgacccggtg
tgtttgctccaatgggacagaactccggatgaggctgaacaaactacgcaggacaacaac
gggatgaaagttgccgggctggtggggcaggctgtgagcattggtgaacaacctgtcgaa
tacagcctgtacctgttcagtggtgacggttccaaggtaaaagttgggtctggctctcag
aacctgacggtaactactgcctatggctctgttggttacaccccgattgatgacattgct
caggtgaatcgcgtcattgaagactttgatgtgaacttcaagcagagcaaaggtcctgat
tgttcaatcactctcagtgctgaccgtgcgaaaaacgaggccgcgaacaaagctgttggc
agtgcaagccgcacctgtctgttcgagtggcagcagatccccgatggactggtccaagac
ccgttatcggaatctccttcgttgtcaggttccctggccgagaacggtgatcaccctctg
gggtggcgggtaagtattttcacccgtaacggcactcgggtgacgttgaacgacgagact
ttcaatgtcgaagcggttgacccaccagctccgaccgttgaactagcctccgactacaac
ttcaaagacaacatctacttggtgccgatgacaggtaactacctgggtgatgccattatc
aactctgaacgagctgatctggatattgccatatcgcgcaactctgatgttcttgagtct
gagaccttcactccgggatggggtgccaccaataaggtgtatcgccgcatcaataccgat
gagcgagcgttgtgggaggagaccacctacaaggtgaacgcggcctacaacaaggtgcct
gatgtgaagactgaggttgtctaccgggctatctctgcaccttctgacagtatccgtcct
atcgttgaagttaaaggtgataccgcgattgacacccaggcattgccggttagggttctc
atccgtgatcagtacaaacctgatggtgactatgacgctaacacgatgggggtgtggaaa
gtacgcctgatccagcaaaaggcctacaacgagacggttgcgctcactgattatgcggaa
gcatcgaacggtgaagctcagttctcagtagacctgtctggtgtggatacttcctccgtc
cgtatcgctgctgaggctgttctggaaagccctgttgagggttacaaccgcacagagttg
tctatcagacctgccttcttgacagtgcttcgtggtggtgccatcggtgctggcgtggag
gctcgcaagttgtctggtgaagctccgttcactgctgtgttcaagctatctttggacgac
cgtcaggatctccgggctaccggccaggttgtgtgggaaaccagtaaggacgacggtaaa
acctgggagcagttcatcccagaagatcgatacaagtatcagcttgtgaagaccttcgac
aagggggagtaccaggttcgggccaaggtggtgaacgtcaactcaggtgcggaaaagtac
accgaagcggtcagtgttgtcgcttacgacaaacctgatattgctgttatcggcccgacc
acgttgtttgtcggaagtgaaggcaagtacacagcgaacctgacgttgaacgatgagcca
atctccggtggcaatgccattgttgagtggtctactgacggtggcaaaacctacgcgcag
acaggggatagcatcacgctttcgagcgatgaagaaacccgataccgcctgtgggctcgt
gtgcgctctgccactgcaccggctgatgacggctatgcctatgaagttgcgaaaacggca
gttgacttccgagcagtgaaggccccccgtccttacgtgacagggccgcgagtcattgag
accggtaagaagtatgtgttcaaagccgaaaccagcctgccttaccgtgggatggacgtg
aagctgaacgggttcttcacgctgcctgatggctcaattgtgcagggtgatactgctgag
tacgtgccttcggacactgacctcaaccaggctactgtagaaacgaagtacaccacctgg
atcgaaggataccgagatcagggtgcagaagcctcgcatagcctacgctcccgcgtgtgg
cagtatgtatggccgagcttcggaatgcaggtcaggaagaacgctgacgtggctcctgcg
acgatcaccgcgtcagtgcggccaattgccttcaacggcaagctggaagaaccgacctac
gagtgggagttgccggaaggcgcagtgattcaggatcagcggcaggatattgtccggtcc
tttgtgatcaatgagccgggcgattacaacatcaaggtgactgtccgtgatgctcgcggc
catgaaaccgtgatcgagcaaccgctcaagatcggccaggcagagccctatgctatcgac
ctgcaatactctggctcgaacaaatacgagcgtgagcctctggatgtgctgttgcgaccg
tacatttctggcggccacccacgcgaccgtatttcgactcgcgtctactcggtagatggt
acgccgttggaaagcagcggttactacggcagagcaactctgggcgctggtgagcacagc
atcaagctgaaaataacctcagaaatggggcatgaagctgagggcgaggtgaacatcaat
gtggcagagaacaagttgcctgcatgtagcctgagctcacgagagaccgttgggtcgtgg
atcgtttatgcgaactgcgaagataccgatggccgcatgaagtcctacgaatggaccatt
gccggtgagttgcagagcatcagctctgatcgagtgactatcagcaagggcacctatgaa
acgatgccgaccatctctctggttggggtcgatgactctggtggcaaatccgaagctgtt
accatgaactaa
DBGET
integrated database retrieval system
