Saliniradius amylolyticus: HMF8227_00291
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Entry
HMF8227_00291 CDS
T05447
Symbol
cafA
Name
(GenBank) Ribonuclease
KO
K08301
ribonuclease G [EC:3.1.26.-]
Organism
salh
Saliniradius amylolyticus
Brite
KEGG Orthology (KO) [BR:
salh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
salh03019
]
HMF8227_00291 (cafA)
03009 Ribosome biogenesis [BR:
salh03009
]
HMF8227_00291 (cafA)
Messenger RNA biogenesis [BR:
salh03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
HMF8227_00291 (cafA)
Ribosome biogenesis [BR:
salh03009
]
Prokaryotic type
rRNA processing factors
HMF8227_00291 (cafA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_E_G
RNase_E_G_Thio
S1
Motif
Other DBs
NCBI-ProteinID:
AWL10799
UniProt:
A0A2S2DZM0
LinkDB
All DBs
Position
294837..296303
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AA seq
488 aa
AA seq
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MSAELLINVTPSESRVALIENGILQEVHVERHTKRGLVGNIYRGKVSRVLPGMQAAFVDI
GLEKAAFLHASDIVIHNEVVDDVSESHLSKQDIRDLVRDGQDIVVQVVKDPIGTKGARLT
TDITIPSRYLVFMPSVSHVGVSQRIEDEQERERLKELVGGFCDDQGGFILRTAAEGVGER
ELRQDADFLRRLWNKIQSRMKRKKSHVLYEDLPLARRVLRDFVGTELDRIRIDSKLAFQE
LKSFTKEYAPEFNDLLEHYLGDRPIFDVYDAENEIQRALNRRVDLKSGGYLIIDQTEAMT
TIDINTGAFVGHRNLEETIFNTNIEATQAIARQLRLRNLGGIIIIDFIDMTDANHQRRVL
HSLETATGKDRAKINIHGFTALGLVEMTRKRTRESLEHILCGECPVCKGRGSIKTVETIC
FEIMREIVRVSRAYDADMFVVYAAPAVAEALMGEESHMLAELEVFVSKQIKVQTELLYSQ
DKYDVVMM
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atgagcgctgagttattgatcaatgttaccccttccgaatccagagttgcgttgattgaa
aacggcatcctgcaagaggtgcacgtggaacgccataccaaacgtggtttggtgggcaat
atctatcgtggcaaggtcagtcgggtgctgcccgggatgcaggctgctttcgtggatatt
ggcctggaaaaggccgctttcctgcatgcatcggacattgtgattcataatgaggtggtc
gatgacgtgtcagaaagtcacctgtccaagcaggacattcgtgatctggtgcgtgacggg
caggacattgtggtacaggtggttaaagatcccatcggtaccaagggggctcggctgacc
acagatattaccatcccttcccgttatctggtatttatgccgagcgtgtctcatgtgggg
gtgtcccagcggatcgaagatgagcaggagcgggagcgattaaaagagttggtgggcggc
ttctgtgacgatcaggggggctttattctgcgcacggccgctgaaggcgtgggcgagcga
gagctgcgtcaggacgccgactttttgcgccgcctctggaacaagatccagtcgcgcatg
aagcgcaaaaaatcccatgtgctttatgaagacttgccgctggcgcgccgggtattgcgg
gattttgtgggcaccgagctggatcgtatccgcattgattctaagctggcgtttcaggag
ctcaaaagctttaccaaggaatacgcgccggagtttaatgacctgctggaacattatctg
ggcgatcgccctattttcgatgtctatgatgcagaaaacgagatccagcgagccctcaat
cggcgcgtggacctaaagtctggcggctatctgatcatcgaccagaccgaagcgatgacc
accatcgacattaataccggtgcctttgtggggcaccgaaacttagaagaaaccatcttc
aacaccaatatcgaggcgacccaggctatcgcacgccagctgaggttgcgtaatctcggc
ggtattatcatcatcgattttatcgacatgaccgacgccaatcaccagcggcgggtattg
cacagtctggaaacggccaccggtaaagacagagccaagatcaatattcatggctttacc
gcgctgggattggtggagatgactcgcaaacgaacccgggaaagtctggaacatatcctc
tgcggcgagtgtccagtatgtaaggggcgtggttcgattaagacggtagaaaccatctgt
ttcgagatcatgcgtgaaattgtccgggtcagccgtgcctatgacgccgatatgttcgtg
gtttatgccgcaccggcggtagcggaagcgctgatgggagaagagtcacatatgctggcc
gaattagaagtgtttgtctctaagcagattaaagttcagaccgagctgctctacagccag
gataagtatgacgtggtgatgatgtga
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