Saliniradius amylolyticus: HMF8227_00343
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Entry
HMF8227_00343 CDS
T05447
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
salh
Saliniradius amylolyticus
Brite
KEGG Orthology (KO) [BR:
salh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
salh03021
]
HMF8227_00343
Transcription machinery [BR:
salh03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
HMF8227_00343
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
HTH_Tnp_ISL3
KORA
GntR
UCR_14kD
SANT_DAMP1_like
2Fe-2S_thioredx
Motif
Other DBs
NCBI-ProteinID:
AWL10849
UniProt:
A0A2S2DZR6
LinkDB
All DBs
Position
complement(343394..344245)
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AA seq
283 aa
AA seq
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MSKNMQSMALSVPQTGSLEAYVQAVNAIDMLSAEEEKSLAERLYHDGDLEAARKLIMSHL
RFVVHIAKSYSGYGLPQGDLIQEGNIGLMKAVKRFNPEVGVRLVSFAVHWIKAEIHEFVL
KNWRIVKVATTKAQRKLFFNLRKAKKRLGWFTHEEVKRVADELGVSTKEVMQMEGRMSSQ
DQAFDLSSDDDENGTYAPVQFLEDKSADVETEVINSDWSDSATQRLHSAIKTLDERSQHI
IQTRWLAEDKTTLQDLADHYDVSAERVRQIEKNAIKKLQSAMI
NT seq
852 nt
NT seq
+upstream
nt +downstream
nt
atgagcaagaacatgcaatcaatggcattaagcgtaccgcagacaggcagtctggaggcc
tatgttcaggctgtgaacgcgattgatatgctctcagccgaagaagaaaagtcactggcc
gaacgcctgtatcacgacggcgatctggaagcggctcgtaagctgattatgtcgcatctg
cgctttgtggtgcatattgccaagtcctactccggttacggcctgcctcagggcgatctg
attcaggaaggcaatatcggtctgatgaaggcagtcaaacgctttaacccggaagtcggc
gtgcgtttggtgtctttcgctgttcactggattaaggccgagattcacgaattcgtactg
aagaactggcgcatcgttaaagtggccaccaccaaggcccagcgcaaattgttctttaac
ctgcgtaaggcgaaaaagcgccttggttggttcacccatgaagaagtgaagcgtgttgcc
gatgaactgggcgtcagcaccaaagaagtgatgcagatggaaggtcgtatgagcagtcag
gatcaagcctttgacctgtcttccgacgacgatgaaaacggcacatatgcaccggttcag
ttcctggaagacaagtcagccgacgtagagaccgaagtcatcaacagcgactggtccgac
agcgcgactcagcgcctgcactccgccatcaagacactggacgagcgcagccagcatatt
atccagacccgctggctggccgaagacaagaccactttgcaggacctggccgatcactac
gacgtttccgccgaacgcgtgcgtcagattgagaaaaacgccattaagaaactgcagtcg
gcgatgatttaa
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