Saliniradius amylolyticus: HMF8227_00545
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Entry
HMF8227_00545 CDS
T05447
Symbol
nudH
Name
(GenBank) RNA pyrophosphohydrolase
KO
K08311
putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
Organism
salh
Saliniradius amylolyticus
Pathway
salh03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
salh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HMF8227_00545 (nudH)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
salh03019
]
HMF8227_00545 (nudH)
Messenger RNA biogenesis [BR:
salh03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
HMF8227_00545 (nudH)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NUDIX
Nudt16-like
NUDIX_4
Tautomerase_2
Motif
Other DBs
NCBI-ProteinID:
AWL11041
UniProt:
A0A2S2E069
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All DBs
Position
537845..538372
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AA seq
175 aa
AA seq
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MIDAEGFRANVGIVICNRIGQVFWARRYGQHSWQFPQGGIDEGETAEQAMYRELHEEVGL
NPQDVEIMGSTRNWVRYKLPKRLIRQGTDPVCIGQKQKWFLLRLRCKEEDVNLLHSGHPE
FDDWRWVSYWYPVRNVVSFKRDVYRRVMKEFVPIAMPSQSHSRQGNQRHRRRRRG
NT seq
528 nt
NT seq
+upstream
nt +downstream
nt
gtgattgatgccgaaggattccgcgcgaatgtcggcatagtgatttgcaacaggataggg
caagtattttgggcaagacgctatggccagcattcctggcagtttccacaaggcggaatc
gacgaaggtgaaactgccgaacaggcgatgtatcgagaacttcatgaggaagtgggatta
aacccccaagacgttgagattatgggtagtacccgtaattgggtcagatacaaattgcca
aagcgcctgatccggcaaggaacggatccggtgtgtatcggacaaaagcagaaatggttt
ctgctgagactgagatgcaaggaggaagacgtgaacctgctgcactcgggccatccggag
tttgatgattggcgctgggtcagctattggtacccggttcgtaatgtggtgtccttcaaa
cgggatgtgtaccggcgggtcatgaaggaatttgtacccattgccatgccaagccaaagt
cattcccgtcaaggcaaccagcgccatcggcgacgtcgtcgggggtag
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