Saliniradius amylolyticus: HMF8227_00555
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Entry
HMF8227_00555 CDS
T05447
Symbol
hepA
Name
(GenBank) RNA polymerase-associated protein RapA
KO
K03580
ATP-dependent helicase HepA [EC:5.6.2.-]
Organism
salh
Saliniradius amylolyticus
Brite
KEGG Orthology (KO) [BR:
salh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
salh03021
]
HMF8227_00555 (hepA)
Transcription machinery [BR:
salh03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
HMF8227_00555 (hepA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RapA_C
Tudor_1_RapA
Tudor_RapA
SNF2-rel_dom
Helicase_C
ResIII
DEAD
AAA_34
Cas3-like_C_2
Flavi_DEAD
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AWL11051
UniProt:
A0A2S2E077
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All DBs
Position
complement(547063..549885)
Genome browser
AA seq
940 aa
AA seq
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MTFSLGQRWASQAESELGLGTIVETQGRRVSVLFPATGETRTYTADNAPLIRVRFDIGDT
VSSHQGWQLEVEQVHEQQGCLTYIGHRLDSGQPEQLKEPMLDHRFTLASPQQRLLSGQFD
EPRWFELRRQGRAEMATHHSSALLGLTGARVDLIPHQLHIARTVADRHAPRVLLSDEVGL
GKTIEAAMIIHRQLLTGRAQRVLIVVPEALLHQWLVEMLRRINVQFAIFDQSRCQALAEE
ANNPFDTEQCVLCSLDFLTQNPDYAQQAAECHWDLLVVDEAHHLTWQPEAPSAEYQVIEH
FTRQTPGVLLLTATPDQLGHASHFARLRLLDPDRFYDYQQFLAEEQGYQALAQAIRPLLA
NGTLDEQQEQTLIDYAPDLEAEIQSLTQSNQSRRQALIEQLIDRHGTGRLVFRNTRHSVP
GFPKRCLHPHPLGSPDEYVGIWQPTTALEQQLLPETYEGIKASWTEFDPRIPWLIEQLKQ
RKGQKVLTLCANNTTALALAEALRHKAGTHAGVFHQGQSIVERDRIANYFADPEQGTDVL
ICSEIGSEGRNFQFAQHLVLFDLPLVPDVLEQRIGRLDRIGQQGDIHIHVPYFKDTAQQR
LLNWYHQGLNAFEHTCATGTAIFEQFADGLYQLLPSCADEAAFEQLLTQTRIANDQLKLQ
LEQGRDRLLELNASGLGQVEPLLEALQDLDNSPRLERFMLRLLDAIGVAQEELSDTIYLL
RPTEAMNTVVPGLTEDGLRVTYDRATALAREDVQFISWDHPLVHHVTDWLASEPQGNSAI
GLMRNPELPNGSYYLQLLYTVDGRAEPGLQLGRFLPPTPVEVVLDANGKLGTPEFTDIKA
VPKDTGLQLVKALSDSIELGLQRGMREAEQRKQDLVTQSLTTMERSLDDELQRLVHLQKL
NPSIRDSEIQALRRQKTELGNAIESAEVQLEAIRLVVNTH
NT seq
2823 nt
NT seq
+upstream
nt +downstream
nt
atgacatttagtttgggacaacgctgggccagtcaggccgagtcagaattaggcctgggc
accatcgtggagactcaaggccgccgggtcagtgtcctgtttcccgctaccggtgaaacc
cgcacctacacggccgataacgcgcctctgatccgagtccgctttgacattggcgatacc
gtttccagtcaccaaggctggcagcttgaggtcgaacaggtacacgagcaacaaggctgt
ctcacttacataggacatcgcctggatagcggccagccggagcagctcaaagagcccatg
ctggatcaccgtttcaccctcgccagcccacagcagagattgctctccggacagtttgat
gaaccgcgctggtttgaactgcgccgtcagggccgtgccgagatggcaacacaccacagc
agtgccttgttgggcctgaccggtgcccgggtcgatttgattccccaccagctccatatt
gcccgcacggtggctgaccgacatgccccccgggtgctcctcagcgatgaagtgggcctg
ggtaagaccatagaagcggctatgatcatccatcgccagctgctcaccggccgtgctcag
cgcgtcttgatcgtggtgccagaagccctgttacatcaatggctggtggaaatgctgcgg
cgcatcaatgtgcagtttgccattttcgatcagagccgctgtcaggcgcttgccgaagag
gccaataacccgttcgacaccgaacaatgcgtgttgtgcagcctggattttctcactcag
aacccagattacgctcagcaagccgccgagtgtcactgggatctgctggtcgtcgatgaa
gcccaccaccttacctggcagcccgaagcgccatcggctgaatatcaagttattgaacat
tttacccggcaaacgccgggcgtattgctgctcaccgccacccccgatcagctcggtcat
gccagtcacttcgcaaggttaagattgcttgacccagatcgcttctacgactaccaacag
tttttagccgaagaacaaggttatcaagctctggctcaggccatccgacctttgttggcc
aacggaacgctggatgaacaacaagagcaaacccttatcgactatgcgcccgaccttgaa
gcggagatccaaagcctgacccaatcgaaccagagccgtcgccaggcgttaatagagcaa
ctgattgaccgtcatggcaccggacgattagtgtttcgtaatacccgtcatagcgtgccc
ggttttcccaagcgctgcctgcaccctcaccctctgggctctccggatgaatacgtcggg
atctggcagcccaccacggcattggaacagcagctgttaccggaaacctatgaaggaatt
aaagccagctggactgaattcgaccctcgtatcccgtggcttatcgaacagcttaagcag
cgcaagggacaaaaggtactgaccctttgcgccaataacaccacggctttggcgctggcc
gaggctctgcgccacaaggcaggcacgcatgccggcgtgttccatcaggggcaaagtatt
gtggagcgcgatcgcatcgccaattactttgccgatcctgagcagggcaccgatgtcctg
atatgcagcgaaatcggcagtgaaggccgtaactttcagtttgcccaacacctggtgttg
tttgatctaccgctggtacccgacgtactggagcagcgtattggacgactggatcgcatt
ggtcagcagggcgatattcatatccacgtcccttactttaaggatacggctcagcagcgg
ctgcttaactggtatcaccagggactgaatgccttcgagcacacctgtgcgacaggtact
gccatctttgagcagtttgccgatgggctttaccagctgttgccatcttgcgctgatgaa
gcggccttcgagcagctcctaacccagacccgtatagccaacgaccagctcaaactccag
ttagagcaaggacgggatcgcctgctggaacttaacgcctctgggttagggcaagtggaa
cccttgctcgaagcgctgcaagacctggataatagccccagactggagcggtttatgctc
agactgctcgatgccatcggcgtggcgcaggaggagctcagcgataccatctacctgctc
cgtcctaccgaagccatgaacactgtagtgccgggattgaccgaggacggactcagagtc
acctatgaccgcgccaccgctctggcaagggaggatgtgcagtttatcagttgggatcat
cccttagtgcaccatgttaccgactggctggccagcgaaccacaaggcaacagtgccatt
ggcctgatgcgtaacccagaactgcccaatggcagttactatctgcagctgctctataca
gtggatggccgtgccgaacccggcttacagctgggacgcttcttaccacccacgcccgtt
gaggttgtcctggacgccaacggcaagctgggtacacccgaatttaccgatatcaaagcc
gtaccgaaagatactggcctgcagttagtcaaagccttgagtgactctattgagctaggg
ctgcaacgcggtatgcgggaggctgagcaacgcaaacaggatttggtgacgcaaagcctg
acaacgatggaacgcagtttagatgacgagctacagcgtttggtgcatctgcagaaacta
aaccccagcattcgcgatagtgagattcaggcgctgagacgacaaaaaaccgaattgggc
aacgccattgaaagcgcagaagtacaactggaggccatcagactggtggtgaacactcac
taa
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