Saliniradius amylolyticus: HMF8227_00870
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Entry
HMF8227_00870 CDS
T05447
Symbol
dnaX
Name
(GenBank) DNA-directed DNA polymerase
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
salh
Saliniradius amylolyticus
Pathway
salh03030
DNA replication
salh03430
Mismatch repair
salh03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
salh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HMF8227_00870 (dnaX)
03430 Mismatch repair
HMF8227_00870 (dnaX)
03440 Homologous recombination
HMF8227_00870 (dnaX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
salh03032
]
HMF8227_00870 (dnaX)
03400 DNA repair and recombination proteins [BR:
salh03400
]
HMF8227_00870 (dnaX)
Enzymes [BR:
salh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HMF8227_00870 (dnaX)
DNA replication proteins [BR:
salh03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
HMF8227_00870 (dnaX)
DNA repair and recombination proteins [BR:
salh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
HMF8227_00870 (dnaX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNA_pol3_gamma3
DNAX_ATPase_lid
DNA_pol3_tau_5
AAA
AAA_22
RuvB_N
AAA_30
AAA_14
AAA_18
AAA_16
AAA_5
AAA_2
Trypan_PARP
Rad17
AAA_19
AAA_7
nSTAND3
AAA_24
PIF1
RTP1_C2
Mg_chelatase
TsaE
gp12-short_mid
Motif
Other DBs
NCBI-ProteinID:
AWL11365
UniProt:
A0A2S2E132
LinkDB
All DBs
Position
912728..914998
Genome browser
AA seq
756 aa
AA seq
DB search
MGYQVLARKWRPANFGELVGQEHVVKAISNALDTDRLHHAYLFTGTRGVGKTTIARIFSK
SLNCEQGMGSTPCGQCHTCVEIDSGNYVDLLEIDAASRTKVEDTRELLDNVQYSPTRGRY
KVYLIDEVHMLSKHSFNALLKTLEEPPPHVKFLLATTDPQKLPVTILSRCLQFNLKALSR
EQIGQQLKYILEQENIGYQSEAIAQLSRAAQGSMRDGLSLTDQAIAQSGGDVSVKVVVDM
LGLMDRNQILKLLHAVAQNDADEVMQQVDALSIQAPDYNQLLADLLSLLHQVALTQLVPD
SCKLETATAKAIYQLAKMLPAEQVQLFYQIALQGRKDLPFASDPRSGLEMTLLRMLAFTP
KAEKKTPQKLDELSKQAYQSEAVSKDDAVADERDSVKSSELERLQAQQDAIWAESDKLQS
PLTAAQPNSHTEQPEPEPEPEPEPEPEPEPESQTAKILNLRARLLQSGNDAESEPVSESK
SSDASTEITTKQVLKAPAPSPEPENNAETEPQATGTPAEPSEEAHQYQPYDEAPPWTDDD
LPPMGESDFGGQSAPVDFSQPDPDTPAVPEAVTAEQPQHDSRHSSSEGAGMKTSQPEPDS
WSADDGDDDPKVVAIDKTLTAFLDNGEKVLHASQLDAWARLIEDSGLMALPKQVALHSNC
QRQDNSFRLTLNSAKEHLLREDTLEQLTLTLSEHMGQSVHVSVNIGETLNTPFALNYHIK
RMRQAHAETVIAEDAGVANLRETFGAKVIPDSVQPR
NT seq
2271 nt
NT seq
+upstream
nt +downstream
nt
atgggatatcaagttctggcccggaaatggcggcctgccaacttcggtgagttggtaggg
caggagcatgtggtgaaagccattagtaatgcgctggacaccgatcgcctgcatcatgcc
tatctgtttaccggtacccggggtgtgggaaagaccaccattgcccgtatattctccaag
agtctgaactgtgagcagggcatgggatcaaccccctgcggccaatgtcatacatgtgtc
gagatcgatagcggcaattatgtggatctgctggagatcgatgcggcttcccgtaccaag
gtggaggacactcgtgagctgctggacaatgttcagtacagtccgacgcgaggtcgctac
aaggtttacctgattgacgaagtacatatgctttccaagcatagcttcaatgcgcttctc
aaaacactggaagagccgccaccgcatgtaaaatttcttttagctacaacagacccacag
aaactgccagtcacgattttgtcacgctgtttgcagtttaaccttaaagccttatcgcga
gagcagataggacagcagctgaaatacattctcgaacaggaaaacattggctatcagagc
gaggccattgctcagttgtccagagcggctcagggcagtatgcgcgacggtcttagcctc
accgaccaggccatagcccaaagcggcggtgacgtctccgttaaggtggtggtggatatg
ctggggctgatggatcgcaatcagattctcaagctgttgcatgccgttgctcaaaacgac
gccgatgaggtgatgcagcaggtggatgccctgtcgattcaggcgcccgattacaaccag
ctgttagcggatttgctgagcttgttacatcaagttgcattgacgcagttggtaccggac
agctgcaaactggaaacggctaccgccaaggccatctatcaacttgctaagatgttacct
gccgagcaggtacagctcttctatcaaattgcgttgcagggtcgaaaagatctccccttc
gcatccgaccccagaagtggtctggaaatgacgctattgcgtatgttggcttttacgcca
aaggctgaaaaaaaaactccgcaaaagctagatgagctgtcaaaacaggcttatcaaagc
gaagctgtttccaaggatgatgcagtagccgacgagcgcgacagcgtcaaaagtagtgaa
ctggagcgactgcaagctcagcaagatgccatctgggcggagtctgataaattgcagtca
ccgttgaccgcagcacagccgaactctcacactgaacagccagagccagagccagagcca
gagccagagccagagccagagccagagccagagagccagaccgctaagattctgaatctg
cgtgcccgtctgttgcagtccggcaacgacgcagaaagcgaaccagtcagcgaatccaag
tcttcggacgcgtcgactgaaattacgacgaaacaggtacttaaggccccggctccatca
cctgaaccagaaaacaacgctgaaactgagccacaagccaccggaacacccgctgaaccg
tcagaggaagcgcaccagtatcagccctatgatgaagcgccgccctggaccgatgatgac
ttaccgcctatgggggagtctgactttggcgggcagtcggcgccagtcgatttctctcag
cctgacccggacacgcctgcagtgccagaggcagtaactgctgagcagccacaacatgat
tcaaggcactcttcctccgaaggcgcgggcatgaagacctcgcagccggagccggatagt
tggtcggccgatgacggggacgatgatccaaaagtagtggccatcgataaaaccttaaca
gccttcttggataatggtgaaaaggtacttcatgccagtcagctggatgcctgggcaagg
cttattgaagacagtggtttaatggcgctgccgaagcaggtggccttgcactctaattgt
cagcgtcaggataatagctttcggctgacactgaattcggccaaggaacacttgctgcgg
gaggacactctggagcaattgaccctaaccctttctgagcatatgggccagtcggtgcat
gtgagtgtcaatattggtgaaaccctgaatacaccgtttgcgctgaattaccatatcaag
cgaatgcgacaggctcatgccgagacggtcattgccgaagatgcgggggtagcgaacctg
agggagactttcggcgcgaaagtgattcccgacagcgttcaacccagataa
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