Saliniradius amylolyticus: HMF8227_01296
Help
Entry
HMF8227_01296 CDS
T05447
Symbol
topA
Name
(GenBank) DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
salh
Saliniradius amylolyticus
Brite
KEGG Orthology (KO) [BR:
salh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
salh03032
]
HMF8227_01296 (topA)
03400 DNA repair and recombination proteins [BR:
salh03400
]
HMF8227_01296 (topA)
Enzymes [BR:
salh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
HMF8227_01296 (topA)
DNA replication proteins [BR:
salh03032
]
Prokaryotic type
DNA Topoisomerases
HMF8227_01296 (topA)
DNA repair and recombination proteins [BR:
salh03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
HMF8227_01296 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_Ribbon_Topo
Zn_ribbon_bTOP1
Toprim
Zn_ribbon_Top1
Zn_ribbon_recom
DmmA-like_C
Toprim_2
Zn_ribbon_LysW
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
AWL11774
UniProt:
A0A2S2E2A6
LinkDB
All DBs
Position
1384826..1387492
Genome browser
AA seq
888 aa
AA seq
DB search
MAKSLVIVESPAKAKTINKYLGNDYVVKSSVGHIRDLPTKAQGKVPPKKPAKELKTFPEE
EKQAYLRRHEYLKLVDRMGIDPENDWEAHYEVLQGKEKVVNELKKLAKNADTIYLATDLD
REGEAIAWHLQELIGSNKQEFKRVVFNEITKTAIQEAFSHPGEVNVDRVNAQQARRFLDR
VVGFMVSPLLWKKIARGLSAGRVQSVAVRLVVEREREIKAFVPEEFWDIHADLTAKSSPL
RMLVAKENGQAFKPKNKAQADEAVSKLKDADYKVVSRESRPTQSKPSAPFITSTLQQAAS
TRLGFGVKKTMMMAQRLYEAGHITYMRTDSTNLSSEAVDACRGYIDESFGANYLPDNPNR
YGSKEGAQEAHEAIRPSNVKVKSDSLSEMERDAQRLYELIWRQFVACQMVPAKYDATTIR
AEANGFELTAKGRVLKFDGWTRVQPPKSKKGEEDLTLPDVKEGDVLDLKKLDPKQHFTKP
PARFSEASLVKELEKRGIGRPSTYASIISTIQDRGYVRLENKRFYAEKMGEIVNDRLLEN
FNDLISYDFTANMEQHLDEIAEGQLNWKQVLNDFYGDFYQKLLSAEKPAEEGGMRTNEAV
QTDIECSKCGRPMMVRTASTGVFLGCSGYNLPPKERCTNTMNLTSGDEVVKVDDEEEMET
EALRAKRRCSQCGTAMDSYLIDEKRKLHVCGNTPVCKGTEIETGTFKIKGYDGPIIECDK
CGSDMELRNGRFGKYFACTSEECKNTRKLLRNGEVAPPKEDPVDLPELPCEKTDAHFMLR
DGASGIFLAAHNFPKSRETRAPKVAELARFRDRLPSKFLYLADAPQEDPDGNPTVVRFSR
KTKQQYVMSETPEGKASGWSAWYDNGKWQAQDKRKGKTTAKKKTKAKS
NT seq
2667 nt
NT seq
+upstream
nt +downstream
nt
atggcaaagtcgttggtcatcgtcgagtccccggcaaaagcaaaaaccatcaataaatac
ctgggtaacgactatgtggtgaaatccagtgtcggacacattcgcgacctgcccactaag
gcccagggtaaggtgccgcccaaaaaaccggccaaagaattgaagacttttccggaggaa
gaaaagcaggcctacctgcgtcgtcacgagtatttaaaactggtggatcgtatgggtatc
gacccggaaaacgactgggaagcccattatgaggtattgcaaggcaaagagaaggtggtc
aacgaactgaaaaagttggctaaaaatgccgacaccatctatctcgcgacggatttggac
cgtgaaggggaagccattgcctggcatttacaggagctgattggctccaacaagcaagag
ttcaagcgggtggtgtttaatgaaatcaccaaaaccgccattcaggaagccttctctcac
ccgggggaagttaacgtagacagggtcaatgcccagcaggcgcgccgctttttagatcgg
gtggtgggctttatggtctcgcctctgttgtggaagaaaattgcccgagggctgtcggcc
ggtcgggtgcagtcggtggcggtgcgcctggtggtggagcgtgagcgtgaaattaaagcc
tttgtgccagaagagttctgggacattcacgcggacttaacggccaagtcatcaccgcta
cgcatgttggtggccaaggaaaacggtcaggcttttaagcccaagaataaggcccaggct
gatgaggcggttagcaagcttaaagacgccgactataaggtggtcagccgggaatcccgg
ccgacccagagcaagccctcggcgccttttatcacttccaccttacagcaggcggccagt
acccgtttaggctttggagtgaaaaagaccatgatgatggcccagcgtttgtacgaagcg
ggccacatcacctatatgcgtaccgactctaccaatttaagcagtgaggccgtagacgcc
tgccgtggctatattgatgagagctttggtgccaactacctaccggataaccccaatcgc
tatggtagcaaagagggggcccaggaagcgcacgaagccattcgcccctccaatgtaaag
gtgaagtccgattcgttgtcggaaatggagcgcgacgctcagcgtttgtatgagctgatc
tggcgtcagtttgtcgcctgtcagatggtgcctgccaaatacgacgccaccaccattcgc
gccgaagccaacggcttcgaactgaccgctaagggccgggtactgaagtttgatggttgg
acccgggttcagccgccaaagtccaaaaagggcgaggaagatctgaccctgccggatgtg
aaggaaggcgacgtgctggatctgaaaaaactggatcccaagcagcactttaccaagcct
ccggcgcgttttagcgaggcctccttggttaaggaactggaaaaacgcggtattggtcga
ccttctacctatgccagcatcatttctactattcaggatcgtggctacgtcaggcttgaa
aacaagcgcttttacgccgagaaaatgggtgagatcgtcaatgaccgcctgctggaaaat
tttaacgaccttattagttacgacttcaccgccaatatggagcagcatctcgacgagatc
gccgaaggtcagctcaactggaagcaagttcttaacgatttctacggtgacttctatcag
aagttgctgagcgcggaaaagcccgccgaagagggcggtatgcgcaccaatgaagcggtg
caaacggatatagagtgcagtaagtgtggccgtcccatgatggtgcgtaccgccagcacc
ggcgtattcttaggctgctcaggctacaacctgccgcccaaagagcgttgcaccaacacc
atgaacctgacctcaggcgatgaagtggtgaaggtggacgacgaagaggaaatggaaacc
gaggcgctgcgggctaaacgccgttgtagccagtgtggtacggccatggacagctacctg
atcgacgaaaaacgtaaactgcatgtgtgtggtaacacgccggtgtgcaagggaacggaa
atcgagactggcacctttaagatcaaaggctacgacggtcccattatcgaatgcgacaaa
tgcggctcggatatggagctgcgtaacggccgctttggtaaatattttgcctgcaccagc
gaggagtgtaaaaacacccgtaagctgctgcgtaatggcgaagtggcgccaccgaaagaa
gatccggtggatttacccgaactgccgtgcgaaaagaccgatgcgcactttatgctgcgt
gacggcgcctccggtattttcctggccgctcataatttcccgaaatcccgcgagacccgt
gcgcccaaagtggccgaactggcccgcttccgcgatcggttgccatctaaattcctgtat
ctggccgatgcgccccaggaagatccagacggtaacccaaccgtcgtgcgctttagtcgt
aagactaagcagcagtatgtgatgagcgaaacgccggaaggtaaggccagtggctggagc
gcctggtacgataatggtaagtggcaggcgcaggataagcgcaagggcaaaaccacggcc
aagaagaaaaccaaggctaagtcctaa
DBGET
integrated database retrieval system
