Saliniradius amylolyticus: HMF8227_01821
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Entry
HMF8227_01821 CDS
T05447
Name
(GenBank) Ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
salh
Saliniradius amylolyticus
Brite
KEGG Orthology (KO) [BR:
salh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
salh03016
]
HMF8227_01821
Enzymes [BR:
salh01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
HMF8227_01821
Transfer RNA biogenesis [BR:
salh03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
HMF8227_01821
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
RNAseD_HRDC_C
HRDC
GlcNAc_2-epim
Motif
Other DBs
NCBI-ProteinID:
AWL12294
UniProt:
A0A2S2E3T3
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All DBs
Position
complement(1955270..1956418)
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AA seq
382 aa
AA seq
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MMITQQTALEAYCRRAAQQKAIAVDTEFVRTRTLYPCLGLVQLNDGHEIALVDPLALEDL
SPLAELMANPNVIKVMHSCSEDMETFWKALGVLPAPVFDTQFAAGLLNMGHALGYAKLVE
QQLGVELDKGESRTDWLARPLTEQQLAYAANDVLYLMQVFPELYQAIGEQERLDWVYQES
ALTGLKRQTELPAEFAYLNIKNNWQLKGAALACLKSLAQWRVKRARAKDKALNFVTREAN
LVAMAKQQPTSKTALSNIQGISANEVRRFGDEWVRLIREAQGLPPEHRPAPLKRLVDYPD
YKKTVQALKLHCQSVAEREQIPVELIGSKKQLNQLLKWLWFDLEECKIQDQKPDVLTGWR
AELLKEGFETVLGRSLARVMPS
NT seq
1149 nt
NT seq
+upstream
nt +downstream
nt
atgatgattacacaacagactgcactggaagcatactgccggcgcgccgctcagcaaaag
gccatcgccgtggacaccgagtttgtgcgtacccgcaccctttatccgtgtttaggcttg
gtgcaactcaatgacgggcatgagattgccctggtggatcctcttgcgctggaggacttg
tcaccattggccgaattaatggcaaaccctaacgttattaaggtgatgcactcgtgttct
gaggatatggaaacgttctggaaggcgctgggcgtattacccgctccggtgtttgacacc
cagtttgctgcgggcctgctcaatatgggccacgcgctgggttatgccaagttagtggaa
caacagttgggggtggagttggataagggggagtcacgtaccgactggctcgcccgccca
ctgaccgagcagcaactggcctatgcggcaaatgatgtgctttaccttatgcaagtgttt
cctgagctttatcaggccattggcgagcaagaaaggttggactgggtttaccaggagtcg
gcgctgacggggttgaagcgtcagacggaactgccggccgagtttgcctatctgaatatt
aagaacaattggcagctcaagggcgcagcgttggcgtgcttaaagagtttggcccagtgg
cgcgttaagcgagccagagccaaagataaagcgctgaactttgttacccgtgaggccaat
ttagtggccatggcgaagcaacagcctaccagtaagacagcgctcagtaatattcagggg
atttcagctaatgaggtgcgtcgctttggcgatgagtgggttcggttgattcgtgaagcg
caggggctaccaccggagcacagacccgcgccgttgaaacgcctggtggactatccggac
tataagaaaacggtacaggccctaaagctgcactgtcagtcggtggcagaacgtgagcag
ataccggttgagttaattggttcgaaaaaacagctcaatcagttgctgaaatggctgtgg
tttgatctcgaggaatgtaaaatacaagaccagaagcctgatgtactaacgggctggcgg
gccgaactactcaaagagggctttgaaaccgtcttgggacgttccctcgcacgtgttatg
ccttcataa
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