Saliniradius amylolyticus: HMF8227_02290
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Entry
HMF8227_02290 CDS
T05447
Name
(GenBank) RNA helicase
KO
K05590
ATP-dependent RNA helicase SrmB [EC:
5.6.2.7
]
Organism
salh
Saliniradius amylolyticus
Brite
KEGG Orthology (KO) [BR:
salh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
salh03009
]
HMF8227_02290
Enzymes [BR:
salh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
HMF8227_02290
Ribosome biogenesis [BR:
salh03009
]
Prokaryotic type
rRNA helicases
HMF8227_02290
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Helicase_C_2
ERCC3_RAD25_C
Cas3-like_C_2
AAA_19
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AWL12743
UniProt:
A0A2S2E532
LinkDB
All DBs
Position
complement(2437637..2438893)
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AA seq
418 aa
AA seq
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MKDRHTLITMNKISFEQLDLDDKLVGACKKLGFQHPTTIQQMTVPVAMEGKDILASAPTG
TGKTAAFLLPACQFLLDFPRKDPGSCRVLILSPTRELALQIHQQAEALTRFTHLTCGVIT
GGINYGTDHAQLDKNLDILVATPGRLFEHIENEAFECRDIDILILDEADRMLDMGFGKVV
NQISAEARWRKQSMLFSATLEGEGIRRFAESILKEPELLQAEPPKSEQGKILQWYHLADS
LEHKFALLCHILKQQTDTAIVFVNKRERLQSLIHQLQSQGIENIYLQGEMPQDKRNQALA
RFKAGEAKVLVATDVAARGIDIPNVSHVINYDLPRTADVYVHRIGRTARAGAKGTAISLV
EAHDFPMIPRIERYIDQRLKPRVIDELRPKHKAPSLPPKKKKTKAKKKPATKGRNKKK
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atgaaagatagacacactctaataaccatgaataagatttctttcgagcaactggacctg
gacgacaaactcgtcggggcctgcaaaaaactgggctttcagcatcctacgaccattcag
cagatgacggtgccggtggcgatggaaggtaaagatatactggcctcggcccccacaggc
actggcaagacggcagcgtttttgttgccagcctgtcagttcctgctcgactttccccgc
aaggatcccggctcctgccgtgtgctgatcttgtcaccaacccgcgagctggctttgcag
atacatcagcaagccgaggcgctgactcgattcacccatctgacttgtggcgtcatcaca
ggcggcattaactatggcaccgatcacgcccagttagacaaaaatctggatattctggtg
gcaacgccgggacggttgtttgagcatatagagaatgaggccttcgaatgtcgggatatc
gatatcctgattctggatgaggccgaccgtatgctggatatgggctttggtaaagtggtc
aatcagatcagcgccgaggcgcgttggcgcaaacagagcatgttgttttcagctacactg
gaaggggagggtattcgccgtttcgccgaatccatcctcaaggagcctgaattgttgcag
gccgagccgccgaagagtgagcaggggaagatcctacagtggtatcatctggccgacagc
ctggagcataagtttgccttgctgtgccatattctaaaacaacaaaccgacacggctatc
gtgtttgtgaataagcgagaacgcttgcagtcactgatccatcagttgcaaagccagggc
attgaaaatatctatctgcaaggtgaaatgccgcaggacaaacgcaatcaggcgctggcc
cgctttaaggccggagaagccaaggtgctggtggccaccgacgtggcggcgcgcggtatc
gacattcccaatgtgagccatgtgatcaactatgacttaccgcgcactgcggatgtgtat
gtgcatcgcattggacgcacggcgcgagcgggcgccaaaggcacggccatttcgttggtg
gaagcgcatgatttccccatgatcccgcgtatcgaacgctatatcgaccagcgtctgaag
cctcgggtcatcgacgagcttagacccaagcacaaggcacccagcctgccgccaaagaag
aagaaaacgaaggctaagaaaaagccagccacgaaaggccgtaacaaaaagaaatag
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