Saliniradius amylolyticus: HMF8227_02918
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Entry
HMF8227_02918 CDS
T05447
Symbol
uvrD
Name
(GenBank) DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
salh
Saliniradius amylolyticus
Pathway
salh03420
Nucleotide excision repair
salh03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
salh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
HMF8227_02918 (uvrD)
03430 Mismatch repair
HMF8227_02918 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
salh03400
]
HMF8227_02918 (uvrD)
Enzymes [BR:
salh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HMF8227_02918 (uvrD)
DNA repair and recombination proteins [BR:
salh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
HMF8227_02918 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
HMF8227_02918 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
Viral_helicase1
AAA_12
Clostridium_P47
Motif
Other DBs
NCBI-ProteinID:
AWL13366
UniProt:
A0A2S2E6T5
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All DBs
Position
complement(3113500..3115671)
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AA seq
723 aa
AA seq
DB search
MDVSELLDSLNDKQRDAVAAPPSDMLVLAGAGSGKTRVLVHRLAWLMDVQGISPFGVLAV
TFTNKAAREMRSRVEALMGMSLQGMWIGTFHGLAHRLLRTHYQEARLPENFQILDADDQQ
RLLKRIIKGMNLDEKHYPPKQAMWFINGHKDEGLRPQHIETQGDVMRTQMREIYKVYQET
CDRSGLVDFAELLLRAHELWLNHPQILAHYQKRFRAVLVDEFQDTNNIQYAWLRMLTSEH
NNMMIVGDDDQSIYGWRGANVDNIQHFLRDFPDAKTIRLEQNYRSTATILKAANRVIENN
SSRLGKDLWTEGNEGEPISLYAGFNELDEARFIVGQIKQWRDQGGALSDTAILYRSNAQS
RVLEEALLQEAIPYRIYGGLRFFERQEVKDALGYLRMINQPLDDAAFERVINTPARGIGE
RTVAQIRDMARSSESSMWQAALTMLQEKRLSGRASKAVQGFVELVLKLQETTGELPLEEQ
ADTAIKQSGLMAMYQAEKGEKAQARVDNLEELVTACKQFEVPDDAEDMTPLAAFLTHASL
EAGETQADQHQDAVQMMTMHSAKGLEFPMVTIAGVEEGLFPSQQSHEEPGRLEEERRLCY
VGMTRAMEKLILTYAESRRIYGQDKYHTPSRFIREIPAECIQEIRLRNTVSKPVSTSRFQ
PATSHSAFDSTGFSLGQRVTHPKFGEGTVLNYEGSGEHARVQVNFDEVGSKWLVLNFAKL
AAV
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
atggatgtatccgaactgctcgactccttaaatgacaaacagcgcgacgccgttgctgcc
ccgccctccgacatgctggtactggcaggagccggtagtggtaagacccgggtactggta
caccggctggcgtggctgatggatgtacaggggatttcgccctttggcgtgctggcggtg
acctttaccaacaaagccgcccgcgagatgcgcagccgggtcgaagctctgatgggcatg
tcgttgcagggtatgtggatcggcaccttccacgggttggcgcatcgcctgctgcgcacc
cactatcaggaggcgcggctgccggaaaattttcagatcctggatgctgacgatcagcag
cgcttgctcaagcgcattatcaagggcatgaacctggacgaaaagcactacccgcccaag
caggccatgtggtttattaacggccataaagacgaaggcctgcgtccccagcatatcgag
actcagggcgatgtgatgcgcactcagatgcgtgaaatctacaaggtctatcaggaaacc
tgcgaccgctcggggttggtggacttcgccgagctgcttttgagagcccatgagttatgg
ctgaatcacccgcagattttggctcattatcagaagcgttttcgcgccgtgctggtggat
gagttccaggacaccaacaacatccaatacgcctggttgcgaatgctcaccagcgagcat
aacaatatgatgatcgtcggcgacgacgatcagtccatctacggctggcgtggcgccaac
gtggataatatccagcactttttgcgggactttcccgacgccaagaccattcggctggag
cagaattaccgctccaccgccaccatccttaaagccgccaaccgggtgatcgaaaacaac
tccagtcgtttgggtaaggatctgtggactgagggcaatgaaggggaacctatttccctg
tatgccggttttaatgagctggatgaggcacgttttatcgtcggtcagatcaaacagtgg
cgggatcagggcggcgcgctcagcgacacggccattctgtatcgcagtaacgcccagtcg
cgggtgttggaggaagcgctgttacaggaagccatcccctaccggatttacggtggcctg
cgcttcttcgagcgtcaggaggttaaagatgcgctgggttatctgcgcatgatcaatcag
ccactggacgatgccgccttcgagcgggtgattaatacgcctgcccgaggcattggcgag
cgtaccgtggcgcagatccgggatatggcgcgcagctccgaatcttcaatgtggcaggcg
gccctgaccatgttgcaggaaaagcgtctctccggccgggcttccaaggcggtgcagggg
tttgtggagctggtcttaaaactgcaggaaaccaccggcgagctgcctctggaagagcag
gccgacaccgccattaaacaatccggcttgatggccatgtatcaggccgaaaagggcgaa
aaggcccaggcccgggtggataacctggaagaactggtgaccgcctgtaagcagtttgag
gtgccggacgatgccgaggatatgaccccgctggcggcctttttaacccatgcttcatta
gaagccggtgaaactcaggccgatcagcatcaggatgcggtgcagatgatgaccatgcac
agcgccaaggggctggaattccctatggtcaccatcgccggagtggaagaaggtttattc
cccagccagcaaagccatgaagagccaggccgtttagaggaagaacgccgtctgtgctat
gtgggcatgacccgggccatggaaaagcttatcctgacttacgccgagagtcgtcgcatc
tatggtcaggacaagtaccatacgccgtcgcgttttattcgcgagatcccggccgagtgc
attcaggagattcgcctgcgcaatacggtcagcaagccagtgtcgaccagtcgcttccaa
ccggcgacttcccactcggccttcgactctaccggctttagtctgggccagcgggttacc
catcccaagtttggcgagggtacggtgctcaattacgaaggcagcggcgaacacgcccgg
gtgcaggtgaacttcgacgaggtgggtagcaaatggctggtactcaattttgccaagctg
gcggctgtatag
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