KEGG   Salinarchaeum sp. Harcht-Bsk1: L593_00215
Entry
L593_00215        CDS       T02693                                 
Name
(GenBank) flap endonuclease-1
  KO
K04799  flap endonuclease-1 [EC:3.1.-.-]
Organism
sali  Salinarchaeum sp. Harcht-Bsk1
Pathway
sali03030  DNA replication
sali03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:sali00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    L593_00215
   03410 Base excision repair
    L593_00215
   03450 Non-homologous end-joining
    L593_00215
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:sali03032]
    L593_00215
   03400 DNA repair and recombination proteins [BR:sali03400]
    L593_00215
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:sali04147]
    L593_00215
DNA replication proteins [BR:sali03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    L593_00215
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     L593_00215
DNA repair and recombination proteins [BR:sali03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     L593_00215
Exosome [BR:sali04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   L593_00215
SSDB
Motif
Pfam: XPG_I XPG_N 5_3_exonuc OrfB_IS605
Other DBs
NCBI-ProteinID: AGM99997
LinkDB
Position
complement(42999..43979)
AA seq 326 aa
MGNAALRELAAIEDVPIDSLAGEVVAIDAHNWLYRYLTTVVRFTRDDAYTTPNGEEVANL
IGICQGVPRFLENDVTPVFVFDGAVTDLKADEVEQRREARAVREEQLERAREEGDAMEVA
RLESQTQRLTDTIQSTSRELLERLDLPVVEAPAEGEAQCAHMAADGTVDAAGTEDYDALL
FGSPVTYRDLTSSGDVERMELQATLDRHGITYEQLVDAGILCGTDFNDGVHGVGPKTAID
AIQEHGDLFGVLDARGEELPHADRIRNLFFDPPVTDDYDIDLTVTPDLDAAREFVVDGWG
VASDEVDRGFERIRDATQQTGLDRWS
NT seq 981 nt   +upstreamnt  +downstreamnt
atggggaacgcagccctgcgagagctagccgcgatcgaggacgtcccgatcgactcgctc
gccggcgaggtcgttgcgatcgacgcgcacaactggctgtaccggtacctgacgacggtc
gttcggttcacgcgcgacgacgcctacaccacgccgaacggcgaggaggtcgcaaatctc
atcggtatctgccagggcgtcccacgatttctcgagaacgacgtcacgccggtgttcgtc
ttcgacggcgcagtgaccgacctgaaggccgacgaggtcgagcaacgacgcgaagcgcgt
gcggtccgcgaggaacaactcgaacgggctcgcgaggagggcgacgctatggaggtcgcc
cgcctcgaatcccagacccagcgcctgacggacacgatccagtcgacctctcgcgaactc
ctcgaacgactcgacctccccgtcgtcgaggcaccggccgagggtgaggcccagtgtgct
cacatggctgcggacggcaccgtcgatgccgccggaacggaggactacgacgcactcctc
ttcggttcgccggtcacctatcgcgacctgacgagcagtggggacgtcgaacggatggaa
ctgcaggcgacgctcgatcgacacggcatcacctacgaacagctcgtcgacgccgggatc
ctctgtggaacggacttcaacgacggcgtccacggcgtcggcccgaagaccgcgatcgac
gcgatccaggagcacggcgacctcttcggggttctggatgcccggggcgaggagcttcca
cacgccgacaggatccggaatctgttctttgatccgcccgtcacagacgactacgatatc
gacctgacagtgacgccggatctcgacgccgcgcgcgagttcgtcgtcgacggctggggc
gtcgcttcggacgaggtcgaccgtggcttcgagcggattcgcgacgcgacgcagcagacg
ggcctcgaccgctggagctag

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