Salinarchaeum sp. Harcht-Bsk1: L593_01635
Help
Entry
L593_01635 CDS
T02693
Name
(GenBank) DNA-(apurinic or apyrimidinic site) lyase
KO
K01151
deoxyribonuclease IV [EC:
3.1.21.2
]
Organism
sali
Salinarchaeum sp. Harcht-Bsk1
Pathway
sali03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
sali00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
L593_01635
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sali03400
]
L593_01635
Enzymes [BR:
sali01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.2 deoxyribonuclease IV
L593_01635
DNA repair and recombination proteins [BR:
sali03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
L593_01635
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
Motif
Other DBs
NCBI-ProteinID:
AGN00280
LinkDB
All DBs
Position
332231..333064
Genome browser
AA seq
277 aa
AA seq
DB search
MKIGAHVSIAGGVDNAVDRQLDVGGNCGQIFTTSPQVWQEPSIDEEEAASFREQTAEKLE
GPWLIHSSYLVNLATPKDDLREKSIASMQAELDAAERLGVQYVNVHLGAHTGAGVEGGLD
NAAETLDALDVPDGVQILVESDAGSGTKLGGEFEHLAGVLDRSEQDLGVCLDTAHSFSAG
YDLSTEDGVEEAVAEFDDVVGLEHLKALHLNDSKHGRGTNKDEHAHVGEGEIGVEGMTAV
LSHPELRDLPFVLETPTENGKSFEWNVDRARELQQDA
NT seq
834 nt
NT seq
+upstream
nt +downstream
nt
atgaagatcggagcacacgtctcgatcgccggcggcgttgacaacgccgtcgatcgacaa
ctcgacgtcggggggaactgcggccagatctttacgacctcgccgcaggtctggcaggaa
ccgagcatcgacgaggaagaagccgcgtcgttccgggagcagaccgccgagaaactcgag
ggcccctggctgatccactcgtcgtacctcgtcaacctcgcgacgccgaaggacgacctc
cgcgaaaagtcgatcgccagcatgcaggccgaactcgacgcggccgaacgactcggggtc
caatacgtcaacgtccacctcggagcccacaccggcgcgggcgtcgagggcggcctcgac
aacgcagccgagacgctcgacgctctggacgtccccgacggggtccagatcctcgtggag
tccgacgcgggctccggcacgaagctcggcggcgagttcgaacacctcgctggcgtcctc
gatcggagcgagcaggacctcggcgtctgtctggacaccgctcacagtttctcggcgggc
tacgatctctcgaccgaggacggtgtcgaggaggcagtggcggagttcgacgacgtcgtc
ggcctggagcacttgaaagcgctccacctcaacgactccaagcacgggcgcggtaccaac
aaggacgagcacgcccacgtcggcgaaggcgagatcggcgtcgaggggatgaccgcggtc
ctctcccacccagagctacgcgacctcccgttcgtcctcgagacgccgacggagaacggc
aagagcttcgagtggaacgtcgaccgggcccgggaactccagcaggacgcctga
DBGET
integrated database retrieval system
