Salinarchaeum sp. Harcht-Bsk1: L593_01675
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Entry
L593_01675 CDS
T02693
Name
(GenBank) replication factor A
KO
K07466
replication factor A1
Organism
sali
Salinarchaeum sp. Harcht-Bsk1
Pathway
sali03030
DNA replication
sali03420
Nucleotide excision repair
sali03430
Mismatch repair
sali03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sali00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
L593_01675
03420 Nucleotide excision repair
L593_01675
03430 Mismatch repair
L593_01675
03440 Homologous recombination
L593_01675
03460 Fanconi anemia pathway
L593_01675
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sali03000
]
L593_01675
03032 DNA replication proteins [BR:
sali03032
]
L593_01675
03400 DNA repair and recombination proteins [BR:
sali03400
]
L593_01675
Transcription factors [BR:
sali03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
L593_01675
DNA replication proteins [BR:
sali03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
L593_01675
DNA repair and recombination proteins [BR:
sali03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
L593_01675
MMR (mismatch excision repair)
L593_01675
DSBR (double strand breaks repair)
HR (homologous recombination)
L593_01675
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_anti-codon
REPA_OB_2
SSB
SHLD2_OB1
Motif
Other DBs
NCBI-ProteinID:
AGN00288
UniProt:
R4W6C0
LinkDB
All DBs
Position
339202..340821
Genome browser
AA seq
539 aa
AA seq
DB search
MGVIEEIHEDLEADVELAEFRDAVEERVERMGGLADEETAAMLVAHELDEDGGEVEGVAE
IEAGMEEVKFVAKVVSVGELKTFERDDDGSENDDVDETEAEEEPAAREEGAAQDEQSNEG
RVLNAEVADETGQIRVAFWDALATDAAERMERGDVVRIAGRPAEGYRGLEVNVDKAEPDP
GVEVDVDLEGTTSIDDLTLGRSDVNVEALVLDTESVRTFDRDDGSEGKVSNLALGDPSGR
IRATLWDGMADRAEELEPGTSVEVVDGYVRERDGDLELHVGERGAVEEIDESVEYEPDST
PIGEVEIDQQVDLVGVVRSADPKRTFDRDDGSEGQVRNVRVQDDSGDIRVALWGDKADLD
ISPGDELALADVEIQDGWQDDLEASAGWQAAVTVLERDDGLPAGGGGTADGDADLSAFGD
DGSGDSGDEAASEGATDDAESSGAERPVAEAADATAEGPGAQRGTSSESVDDADDDAVVA
VGETVEFTGVVVQAGDPIILDDGEQTVRVDADADIHLGDEITVRGEGVEDDRIAAADVF
NT seq
1620 nt
NT seq
+upstream
nt +downstream
nt
atgggcgtcatcgaggagatccacgaggacctcgaggccgacgtggagttagcggagttc
cgcgacgcggtcgaggaacgcgtcgagcggatggggggactcgcggacgaggagaccgcg
gcgatgctcgtcgcgcacgaactcgacgaggacggcggcgaagtcgagggcgtcgcggag
atcgaagcgggcatggaggaggtcaagttcgtcgcgaaggtcgtctccgtgggcgaactg
aagaccttcgagcgagacgacgacgggagtgagaacgacgacgtcgacgaaaccgaagca
gaggaggaaccggctgcccgcgaggagggagcagcccaggacgaacagtccaacgagggc
cgcgtactcaacgccgaggtagccgacgagaccgggcagatccgggtcgccttctgggac
gcactcgccaccgacgccgccgagcggatggaacgaggcgacgtcgtccggatcgctggc
cggcccgccgagggctaccggggcctggaagtgaacgtcgacaaggcagaaccggatcca
ggcgtcgaggtcgacgtcgatctggagggcacgaccagcatcgacgacctgacgctgggc
cggtcggacgtcaacgtcgaggccctcgtactcgacaccgagtccgtccgtaccttcgac
cgcgacgacggctcggaggggaaggtctccaatctcgcactcggcgatccctcggggcgc
atccgggcgacgctctgggacggcatggccgatcgcgccgaggaactcgaacccggcacc
tccgtcgaggtcgtcgacggctacgttcgcgagcgcgacggcgacctcgaactccacgtc
ggcgaacgtggcgcagtcgaggaaatcgacgagtcggtcgagtacgaaccggactcgacg
ccgatcggcgaggtcgagatcgaccagcaggtcgacctcgtcggcgtcgtccgttcggcc
gatcccaaacgcaccttcgacagggacgacgggtccgagggccaggtccgaaacgttcgc
gtccaggacgactcgggagacattcgcgtggccctctggggcgacaaggcggacctcgac
atctcaccgggtgacgaactcgcgcttgcggacgtggagatccaggacggctggcaggac
gacctcgaagcatctgcaggctggcaggcagcggtgacggtgctcgagcgcgacgacggc
ctccccgcaggtggcggcgggaccgccgacggcgacgcggacctctcggccttcggagac
gacggctcgggcgacagtggcgacgaagcggcgagcgagggcgcgacggacgacgccgaa
tccagcggcgcggaacgaccggtggccgaggcagcggacgcgaccgcagaggggccgggc
gcccaacggggcaccagttcggagtcggtcgacgacgccgacgacgacgcggtcgtcgcc
gttggcgagactgtcgagttcaccggcgtcgtggtccaggctggcgatccgatcatcctc
gacgacggcgagcaaacggtccgcgtcgacgcagacgccgacatccacctcggcgacgaa
atcaccgtccggggcgagggcgtcgaggacgaccggatcgccgccgccgacgtcttctga
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