Salinarchaeum sp. Harcht-Bsk1: L593_01915
Help
Entry
L593_01915 CDS
T02693
Name
(GenBank) putative hydrolase of the metallo-beta-lactamase superfamily protein
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
sali
Salinarchaeum sp. Harcht-Bsk1
Pathway
sali03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sali00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
L593_01915
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sali03019
]
L593_01915
Messenger RNA biogenesis [BR:
sali03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
L593_01915
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_J_b_CASP
Lactamase_B_2
Lactamase_B
RMMBL
Motif
Other DBs
NCBI-ProteinID:
AGN00334
UniProt:
R4W856
LinkDB
All DBs
Position
389817..391166
Genome browser
AA seq
449 aa
AA seq
DB search
MEIEIATIGGYQEVGRQMTAVRAGDDVVIFDMGLNLSKVLIHDNVETERMHSLDLIDMGA
IPDDRIMSDLEGDVQAIVPTHGHLDHIGAISKLAHRYDAPVVATPFTIELVKQQIESEQK
FGVENDLVKMDAGGTMSIGDSGVELEFVNVTHSIIDAINPVLHTPEGSIVYGLDKRMDHT
PVIGDPIDMKRFREIGREDNGVLCYIEDCTNAGKKGRTPSESVARKHLKDALYSMEDYDG
GIVATTFSSHISRVTSLVEFAKDIGRQPVLLGRSMEKYSGTAERLDFVDFPEDLGMFGHR
KSVDRTFKRIMNEGKEDYLPVVTGHQGEPRAMLTRMARGETPYELDAGDKVVFSARVIPE
PTNEGQRYQAEKLLGMQGARIYDDIHVSGHLNKEGHYEMLDALQPQNVIPAHQDLSGFSD
YVNLCEDEGYRMDRDLHISRNGNLIQLVD
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atggaaatcgaaattgccacgatcggcggctaccaggaagtcggccgccagatgactgcg
gtgcgagcaggcgacgacgtcgttatcttcgacatgggcctgaacctgtcgaaggtcctc
atccacgacaacgtcgagaccgagcggatgcacagcctcgacctgatcgacatgggtgcg
atcccggacgatcgcatcatgagcgacctcgagggcgacgtgcaggctatcgtgccgacg
cacggtcacctcgaccacatcggcgccatctccaagctggcccatcgctacgacgccccc
gtcgtggcgacgccgttcacgatcgaactggtcaagcagcagatcgagagcgagcagaag
ttcggcgtcgagaacgacctcgtcaagatggacgcgggcggcacgatgtccatcggcgac
tcgggcgtcgaactcgagttcgtcaacgtcacccactccatcatcgacgcgatcaacccc
gtcctccacacgccggaggggtcgatcgtctacgggctggacaagcgcatggaccacacg
cccgtcatcggcgacccgatcgacatgaagcggttccgcgagatcggtcgcgaggacaac
ggcgtgctgtgttacatcgaggactgtacgaacgctggcaagaagggccgaacgcccagc
gagtccgtcgcacgcaaacacctgaaggacgcgctgtactcgatggaagactacgacggc
ggcatcgtcgccacgacgttctcctcgcacatctcccgcgtcacctccctcgtggagttc
gcgaaagacatcggccggcagccagtgctgctcggccgctcgatggagaagtactccggc
acggcagagcggctcgacttcgttgacttccccgaagacctcgggatgttcggtcaccgg
aagtccgtcgaccgcacgttcaagcggatcatgaacgagggcaaggaggactacctgccc
gtcgtcaccggtcaccagggcgagccccgcgcgatgctcacccggatggcccgtggcgag
acgccctacgaactggacgccggcgacaaggtcgtcttctccgcgcgcgtcatccccgag
ccgaccaacgagggccagcgctaccaggcagagaagctgctgggcatgcagggcgcccgg
atctacgacgacatccacgtctccggccacctcaacaaggagggccactacgagatgctc
gacgcgctccagccccagaacgtcatccccgctcaccaggacctcagcgggttctctgac
tacgtgaacctctgtgaggacgagggctaccgcatggaccgggacctccacatctcccgc
aacggcaacctcatccagctcgtcgactag
DBGET
integrated database retrieval system
