Salinarchaeum sp. Harcht-Bsk1: L593_02955
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Entry
L593_02955 CDS
T02693
Symbol
truD
Name
(GenBank) tRNA pseudouridine synthase D
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
sali
Salinarchaeum sp. Harcht-Bsk1
Brite
KEGG Orthology (KO) [BR:
sali00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sali03016
]
L593_02955 (truD)
Enzymes [BR:
sali01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
L593_02955 (truD)
Transfer RNA biogenesis [BR:
sali03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
L593_02955 (truD)
Prokaryotic type
L593_02955 (truD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
AGN00542
UniProt:
R4W3H9
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All DBs
Position
complement(611840..613327)
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AA seq
495 aa
AA seq
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MADSSDDGATRRFDLRPAHPTEQAVGIEHYVTDVDGTGGRLRRSPDDFRVREIERIDPEP
IDADPGAYGHVVVRATLRSWDTNDFAGTLSDRLGISRHRVHWAGTKDKRAVTTQLFSIDG
VDPAVIPGAGAASSVDGAADATGQKATPAIDEADVEVLGRLGRSIELGDLVGNEFEVRIT
DAERPEHVGPITDALATFRTGGDAPDRDEPGNPTPVAVPNFFGQQRFGSRRPITHAVGLA
IVRGEWREAVRIYVADAYDSEPDSTQDARAAAGDCFDDGDWTGALDAMPNRLGYERTLLH
ALERADADPGDDAAVFREALADLPENLQRMFVHAAQSYAFNRILSARLDAGLPFHEPVAG
DVVCFADAGAPEEVALPDTDRLQAVTADRVDTIARHCERGRAFVTAPLVGTDTDLGDGDP
GEIERRILDDLDLSPGDFDLPDPFGSTGTRRAVLVGTELSIDDHDEPTLSFALPKGSYAT
VLLREYLKVDPIALG
NT seq
1488 nt
NT seq
+upstream
nt +downstream
nt
atggccgactcgtccgacgacggagctacgcgacggttcgatctccggcccgcacacccg
acggagcaggccgtcggcatcgagcactacgtcaccgacgtcgacgggaccggcgggcgc
ctccgacgctcgcccgacgacttccgcgtccgcgagatcgagcggatcgatccggagccg
atcgacgccgatccgggagcctatggacacgtggtcgtgcgtgcgacgctccggagctgg
gacaccaacgacttcgccggaaccctctctgatcggctcggaattagccgtcaccgcgtg
cactgggccggcacgaaggacaagcgcgcggtgacgacgcagctgttctcgatcgacggc
gtcgatccggcggtgatcccgggggctggagcggcgagcagcgtcgacggggctgccgac
gcgaccggccagaaagccactcccgccatcgacgaggccgacgtcgaggtgctcggcagg
ctcggtcgctcgatcgaactcggcgacctcgtcggcaacgaattcgaggtgaggatcacc
gacgccgagcggccggagcacgtgggcccgatcaccgacgcgctcgccacgttccgaacc
ggcggcgacgcgccggaccgcgacgaaccggggaatccgaccccggtcgccgtgcccaac
ttcttcggacagcagcgcttcggaagccgtcgaccgatcacgcacgccgtcggcctggcg
atcgtccgcggcgagtggcgcgaggcggtccgcatctacgtcgccgacgcctacgactcc
gaacccgattcgacccaggacgctcgcgctgccgccggcgactgtttcgacgacggcgac
tggaccggcgcgctggacgcgatgccgaaccggctgggctacgagcggacgctgctccac
gcgctggaacgggcggacgcggaccccggggacgacgctgccgtcttccgagaagcactg
gccgacctgccggagaacctccagcgaatgttcgtccacgccgcgcagtcctacgcgttc
aaccggatactctcggcgcgactggacgccggcctgccgttccacgaacccgtcgccggc
gacgtggtctgctttgcagacgcgggagcgcccgaagaggtcgcgctcccggacaccgat
cggttgcaggcggtcactgcggatcgcgtcgacacgatcgctcgtcactgcgagcgaggc
cgggcgttcgtcaccgcgccgctcgtcgggacggacaccgacctcggcgacggcgatccg
ggggagatcgagcggcggatactcgacgacctcgacctgtcgcccggcgatttcgacctg
cccgatccgttcggctcgaccgggacgcgtcgggcggtgctcgtcgggaccgagctctcg
atcgacgaccacgacgagccgacgctctccttcgcgctgccgaagggatcctacgcgacg
gtgctgctgcgggagtacctgaaagtcgacccaatcgcactcgggtag
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