Salinarchaeum sp. Harcht-Bsk1: L593_05635
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Entry
L593_05635 CDS
T02693
Name
(GenBank) PAS/PAC sensor protein
KO
K06930
HTH-type transcriptional regulator, bacterioopsin transcriptional activator and related proteins
Organism
sali
Salinarchaeum sp. Harcht-Bsk1
Brite
KEGG Orthology (KO) [BR:
sali00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sali03000
]
L593_05635
Transcription factors [BR:
sali03000
]
Prokaryotic type
Helix-turn-helix
Other families
L593_05635
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BAT
PAS_4
GAF_2
PAS_3
PAS_9
GAF
GAF_3
HTH_10
HAMP
PAS
Sigma70_r4
Sigma70_r4_2
HTH_5
Motif
Other DBs
NCBI-ProteinID:
AGN01076
UniProt:
R4VXT8
LinkDB
All DBs
Position
complement(1193363..1197013)
Genome browser
AA seq
1216 aa
AA seq
DB search
MPPSALGSTDWHVLVSVVSLGGMAATSDVERLIEGVERVAAGDYDVAFELERDDELGRLA
SALEEMTAAIATRKADPTDADEPDPADREDELHRYARHFEAVFNDPNLLAVILDPDGTLR
EINDRAMGMIDADRESVLGEPFWETPWWEGDEALQAEIRSGIERAATHDEYVEYVADHDE
TETAAYTSEGVIRPVSDASGNVESLVVSARDITERREREEELREARDRLTKTNRALERLY
QIGADRDASLEEKIQTLLDLGRERLDLSGGYLSSIDPEDDRFEFVQTSGLDTMSPGTVTS
LTETYCNETITTGEVFAIADAPAEGWGEHPAYQRWGSAAYIGGRVYVEGELAGTLAFVDD
DPAPSGFTAEQYTFVDLATQWVGYELERRRKSDRLVEYTSFIDDVLDTIEDVFYVVGPDS
AFERWNQSLGEATGFSEEEIEGMEPLDFIAPEDRDALASALDEAYETGSARMEARVLTKD
GEKVRYDFLGSVLEDPDGNEVLVGIGRDVSERAERQYELKRTKYLLDLAQRIAHVGGWEL
DVRSKPYVFEATDEFYRIHGATPADHVDVETVREFYHSDERRGIDRVMADAIENGESYDM
EVRLATDGRGRRWVRAIGEPVTSDGEIVAVRGSVQDITEQKEQELTLESLHELSRGLLEV
DSRPAVAARVRDAAVGVLDMPCVAVYLFEESTGRLEPAAVSEAFETVCRDEGVGFDAEDD
SLVWESYVSGEAIEIDDPAQDNSPILEASDHAGMLVPIGEYGVLLLASGRDAPDADDRRL
AETLVATMETALQRLDNEVALRSQQSQLETQNRRLRRQIQITEIIRRVDRSLVGASSRDE
VESAVCERLVESDDAAFAWIGALDEQGAELVPRTWAGIGHEYLDAISLSTSSETPDPAVQ
TAVSGDPTVVESIVEGVTTEHWRKHALVWQFSSAIAVPLELDEYSYGVLAVYGTEPGAFG
DLERSVLQDLGGTIANAINAVEARRALYADEFVELRLRLEEEADFLGQLAAASGARVEYV
GLATHGEHESRLFFETSGVAAETVRDALEDLHSVVEFRRIGEAEEPTLFEATVAGTVLAA
SLVGRGGVPRSMVASGGDLSVVVDVPTTTEVREFLDMLRERYSSVQLIGRRNVRRDVQTR
QELVAGLFDELTERQLEVLRTAFFAGFFEWPRESTGEDVAELLDVSQPTVNRHLRHALAA
LLQVMFEEEPTAIAPA
NT seq
3651 nt
NT seq
+upstream
nt +downstream
nt
gtgccaccctccgcactgggcagcacggactggcacgtcctcgtcagtgtggtctcactc
ggtgggatggcggcaacgagcgacgtcgagcggctcatcgagggcgtcgaacgggttgcg
gcgggggactacgacgtggcgttcgaactggagcgcgacgacgaactgggacggcttgcg
agcgcgctcgaagagatgaccgcggcgatcgcgacgcgcaaggcggatccgaccgacgcc
gacgagcccgatccagcggaccgcgaggacgaactccaccggtacgcgcggcacttcgag
gcggtgttcaacgacccgaacctgctcgcggtgatcctcgatcccgacgggacgctccgg
gagatcaacgaccgggccatggggatgatcgacgccgaccgggagtccgtcctcggcgaa
ccgttctgggagacgccctggtgggagggtgacgaagcgctgcaagccgagatccgctct
ggaatcgagcgtgcggccacgcacgacgagtacgtcgagtacgtcgccgaccacgacgag
acagagacggccgcctacacgtccgagggcgtgatccgcccggtgtcggacgcgtcgggg
aacgtcgagtcactcgtcgtgtcggcccgggacatcaccgaacgccgggagcgagaggag
gaactccgggaagcccgcgaccgcctcacgaagacgaaccgggcgctcgagcgactctac
cagatcggcgccgaccgcgacgcgtctctcgaggagaagatccagacgctgctggacctc
ggccgcgaacgcctcgacctttccggcgggtacctctcgtccatcgaccccgaggacgac
cggttcgagttcgtgcaaacgagcggtctcgacacgatgtctccggggacggtcacctcg
ttgacggagacgtactgcaacgagacgatcaccactggcgaggtgttcgcgatcgccgac
gccccggccgagggctggggggagcacccggcgtaccagcgctggggctcggccgcgtac
atcggcgggcgggtgtacgtcgagggcgaactcgccggcacgctggccttcgtcgacgac
gatcctgcgccgtcggggttcaccgccgaacagtacacgttcgtcgacctcgcgacgcag
tgggtcggctacgaactcgaacgacgccgcaagtccgatcgcctcgtggagtacacctcg
ttcatcgacgacgtcctcgacacgatcgaggacgtcttctacgtcgtcggtccggactcg
gcgttcgagcgctggaatcagtcgctcggcgaggccacgggcttctccgaggaggagatc
gaagggatggagccactcgacttcatcgccccggaggatcgggacgccctcgcatccgcg
ctcgacgaggcgtacgaaactggctccgcccggatggaggcgcgcgtcctgacgaaggac
ggcgagaaggtccgctacgacttcctggggtcggtgctcgaggatcccgacggaaacgag
gtgctcgtgggcatcggacgggacgtcagcgagcgcgccgagcgccagtacgaactcaaa
cggacgaagtacctgctcgacctggcacagcggatcgcccacgtcggcgggtgggaactc
gacgttcgatccaaaccgtacgtcttcgaggcgaccgacgagttctaccggattcacggc
gcgacgcccgcggaccacgtcgacgtcgagaccgttcgcgagttctaccactccgacgag
cgccggggcatcgaccgcgtgatggcggacgcgatcgagaacggcgagagctacgacatg
gaggtgcggctcgcgaccgacggtcgcggccgtcggtgggtccgggcgatcggcgagccg
gtcacgtccgacggcgagatcgtcgccgtccgcggctccgtgcaggacatcacggagcaa
aaagaacaggagctaactctcgaatcgctccacgaactctcccgcgggctcctcgaagtc
gactcgcgtccggcagtggccgcgcgggtccgcgacgcggccgtcggcgtcctcgacatg
ccttgcgtcgccgtctatctcttcgaggagtccacgggccggctcgaacccgccgcggtg
tcggaggccttcgagacggtctgtcgcgacgagggggtcggcttcgacgccgaggacgac
tcgctggtgtgggagagctacgtcagcggcgaggcgatcgagatcgacgacccggcgcag
gacaactcgccgattctcgaagcctccgaccacgccgggatgctcgtaccgatcggagag
tacggcgtcttgctcctcgcctcgggcagagacgcgcccgacgccgacgaccgccggctc
gccgagacgctcgtcgcgacgatggagaccgcgctccagcggctcgacaacgaggtcgcg
ctccggagccagcagtcccagctcgagacacagaaccggcggctccgccgacagatacag
atcaccgagatcatccggcgcgtcgatcgctcgctggtcggcgcgagcagccgcgacgag
gtggagtcggcagtgtgcgagcgactcgtcgagagcgacgacgccgccttcgcctggatc
ggcgcactcgacgagcagggagccgaactcgttccgcggacctgggccggcatcggtcac
gagtacctcgacgcgatttcgctctcgacgtcatcggagacaccggatccggcggtccag
accgcggtgtccggcgaccccaccgtcgtcgagtcgatcgtcgaaggcgtcaccaccgag
cactggcgcaagcacgcgctcgtctggcagttctcctcggcgatcgcggttcccctggag
ctcgacgagtacagctacggcgtcctcgcggtctacggtaccgagccgggcgcgttcggc
gacctcgaacgctccgtgttgcaggacctcggcggcacgatcgccaacgccatcaacgcc
gtcgaggcccgtcgcgccctctacgccgacgagttcgtcgaactccggctgcgcctcgag
gaggaggcggacttcctgggccagctcgcggcggcgtccggcgcccgcgtggagtacgtc
gggctggcgacccacggggagcacgaatcgcgactgttcttcgagacgtcgggtgtggcg
gcggagaccgttcgggacgcgctcgaggacctccactcggtcgtcgagttccgtcggatc
ggcgaggccgaggagccgacgctgttcgaggcgacggtcgcggggacggtgctcgccgcg
agcctcgtcggtcgcggcggcgtgcccagatcgatggtcgccagcggtggcgatctctcc
gtcgtcgtggacgttccgacgacgaccgaggtccgcgagttcctcgacatgctccgcgaa
cggtacagctccgtccagttgatcgggcgccggaacgtccgtcgggacgtccagacccgg
caggagctggtcgccggcctgttcgacgaactgaccgagcggcagctcgaggtcctcagg
acggccttcttcgctggcttcttcgagtggccccgggagtccaccggcgaggacgtcgcg
gaactgctcgacgtctcacagccgacggtgaaccggcacctgcgccacgcgctcgcggca
ctgctccaggtgatgttcgaggaggagccgacggcgatcgcaccggcgtag
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