Salinarchaeum sp. Harcht-Bsk1: L593_07585
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Entry
L593_07585 CDS
T02693
Name
(GenBank) DNA helicase, Rad3
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
sali
Salinarchaeum sp. Harcht-Bsk1
Pathway
sali03022
Basal transcription factors
sali03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
sali00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
L593_07585
09124 Replication and repair
03420 Nucleotide excision repair
L593_07585
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sali03021
]
L593_07585
03036 Chromosome and associated proteins [BR:
sali03036
]
L593_07585
03400 DNA repair and recombination proteins [BR:
sali03400
]
L593_07585
Enzymes [BR:
sali01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
L593_07585
Transcription machinery [BR:
sali03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
L593_07585
Chromosome and associated proteins [BR:
sali03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
L593_07585
DNA repair and recombination proteins [BR:
sali03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
L593_07585
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C_2
DEAD_2
ResIII
DEAD
AAA_16
PhoH
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
AGN01462
UniProt:
R4W517
LinkDB
All DBs
Position
1673975..1676455
Genome browser
AA seq
826 aa
AA seq
DB search
MTEPSDWRAIFGHEEPYEPQVDGVETALATAREGGYLALEGACGTGKTMLALTAGLHLVR
DPESDFSRVLVLTSVKQQLRQFEDDLRLINEELPEEFRPYSGLTLVGKADVCPYSREHAG
GIDEENVYDRCEGLRDRTRGLTGEDGETSASQLVSAARRQQIGLDDGATRGAAAATYLET
AGEPAPYPRELPEHDDEVEYCPFYAQFLDELPDGADSDPAEAIPFEFRERGLMDTEDLVG
LSVEHGTCPHSMMGALLGEVEVVLGNYYHAFDPTTSTAFTAPILDSETFVICDEAHMLEP
RVRDLVSDGVADATLRDAEAELTRVIEPLREGRTEGGADEQLVKNELASVDLTRSDLESV
RSFVRDLRESLDRRVVDHLNREHPGWRDSLEGLPDEEIPLRPPESPQTDEITEWASRNGH
EEAWYRAEAVGAFVGRLLDEHEDEERERAAPAAGRTLAAWARCDHEHYFRSLALERTWDA
THPPESWRRAYNGRLNLHNCVPGDAIGDRLADFGGGVLMSATLAPLDVFAEVSGLAHLQA
EYDRPVETRQYGLDFPVENRESYAVAAPKFTYDNRGPPPARGGLGGPPDGAAGDAAADGS
RAATGSGATSSDGFDGVGDEGTRAVRRAYLDAISTVADAPGNVLVGMPSYAEAEWAAAAI
DGDTRVDKPVLLDESSAESETQALKDEFFAGPSKVLVTSLRGTLTEGVDYRGDRLAAAVV
CGVPIVDTSSPRTRAIRAAYDRAFGGGERSVGFEYSLTIPAVRKARQAIGRVIRGPEEVG
VRVLVDERYAREDWDSVRQYLPVEFDAVSPDMLDLGLDRFWDRHRS
NT seq
2481 nt
NT seq
+upstream
nt +downstream
nt
atgaccgagccgtcggactggcgggcgatcttcgggcacgaggagccctacgagccccag
gtcgacggcgtcgagaccgcgctcgcaaccgcgcgcgagggcggctatctcgcgctggag
ggcgcctgcgggacgggcaagacgatgctcgcgctcaccgcgggcctgcacctcgttcgc
gaccccgagagcgacttttcgcgggtcctcgtgctcacgagcgtcaaacagcaacttcgc
cagttcgaggacgacctgcgactgatcaacgaggagttgcccgaggaattccggccctac
tccgggctcacgctcgtcggcaaggccgacgtctgcccctacagccgcgagcacgccggc
ggcatcgacgaggagaacgtctacgatcgctgtgagggtctccgggatcgcacccgcggg
ctgaccggcgaggacggcgagacgtcggcgagccagctcgtcagcgctgctcgccgccag
cagatcggcctcgacgacggcgcgacccgcggtgcggcggcagcgacctacctcgaaacg
gccggtgaaccggcgccctatccacgggagcttcccgagcacgacgacgaggtcgagtac
tgcccgttctacgcgcagttcctcgacgaacttcccgacggcgccgacagcgaccccgcg
gaggcgatccccttcgagttccgggagcgcggcctcatggacaccgaggacctcgtcggc
ctctccgtcgagcacggcacctgcccgcactcgatgatgggggcgttgctcggggaggtc
gaggtcgtgctcgggaactactaccacgcgttcgacccgacgacgtcgacggcgttcacg
gccccgatcctggactccgagacgttcgtgatctgcgacgaggcccacatgctcgaaccc
cgcgtccgtgacctcgtctccgacggcgtcgcggacgcaacgctgcgcgacgcggaggcg
gagctcacccgcgtgatcgagccactgcgtgagggccggaccgagggtggcgccgacgag
cagctcgtgaagaacgagctggcgtccgtcgacctcacccggtcggacctcgagtcggtc
cgctccttcgtccgcgatcttcgcgagtccctcgatcggcgcgtcgtcgaccacctcaac
cgcgagcacccgggctggcgcgactcgctggaggggctccccgacgaggagatccccctg
cggccgccggaatcgccccagaccgacgagatcaccgagtgggcgagtcggaacggccac
gaggaggcgtggtaccgcgcggaggcggtcggcgcgttcgtcggccgactcctcgacgag
cacgaggacgaggaacgcgagcgcgccgcgcccgcggcgggccggacgctggccgcctgg
gcccgctgcgaccacgagcactacttccggtcgcttgcactcgagcggacctgggacgcc
acccacccgcccgaatcctggcgacgcgcgtacaacggccggctcaacctccacaactgc
gtccccggcgacgccatcggcgaccgtctcgcggacttcggcggcggcgtcctgatgagc
gcgaccctcgcgccactcgacgtcttcgcggaggtctccggcctcgcgcacctccaggcc
gagtacgaccgccccgtcgagacccggcagtacgggctcgacttccccgtcgagaaccgc
gagagctacgccgtcgctgccccgaagttcacctacgacaaccgcggcccgccacccgct
cgtggtgggctcggcggaccgcccgacggcgcggctggcgacgcggcggcggacggcagt
cgggcggcgaccggcagcggcgcgacgtcgtcggacggcttcgacggcgtcggcgacgag
gggacccgcgcggtccgccgggcgtacctcgacgcgatctcgacggtcgccgacgcgccc
gggaacgtcctcgtcggcatgcccagctacgccgaagcggagtgggcggcggccgccatc
gatggcgatacccgggtcgacaaaccggtcctgctcgacgaatcgagcgccgagtccgag
acgcaggccctcaaggacgagttcttcgcgggaccgtcgaaggtgctcgtcacgagcctc
cgaggcaccctgacggaaggcgtcgactaccggggcgaccggctcgcggcggcggtcgtc
tgtggcgtgccgatcgtcgacacatccagcccccgcacacgggcgatccgggcggcctac
gatcgggccttcggcggtggcgagcgctccgtcggcttcgagtactcgctgacgatccca
gcggtccggaaggccaggcaggcgatcggtcgggtgatccgcggccccgaggaggtcggc
gtccgggtactcgtcgacgagcggtacgcgcgcgaggactgggacagcgtccgccagtac
ctccccgtggagttcgacgccgtgtcgccggacatgctcgacctcggcctggatcggttc
tgggatcggcaccgttcctga
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