Salinarchaeum sp. Harcht-Bsk1: L593_07845
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Entry
L593_07845 CDS
T02693
Name
(GenBank) DNA helicase, Rad3
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
sali
Salinarchaeum sp. Harcht-Bsk1
Pathway
sali03022
Basal transcription factors
sali03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
sali00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
L593_07845
09124 Replication and repair
03420 Nucleotide excision repair
L593_07845
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sali03021
]
L593_07845
03036 Chromosome and associated proteins [BR:
sali03036
]
L593_07845
03400 DNA repair and recombination proteins [BR:
sali03400
]
L593_07845
Enzymes [BR:
sali01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
L593_07845
Transcription machinery [BR:
sali03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
L593_07845
Chromosome and associated proteins [BR:
sali03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
L593_07845
DNA repair and recombination proteins [BR:
sali03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
L593_07845
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C_2
DEAD_2
DEAD
ResIII
SLFN-g3_helicase
AAA_34
ATPase
PhoH
HBB
SecA_DEAD
Motif
Other DBs
NCBI-ProteinID:
AGN01514
UniProt:
R4W9H3
LinkDB
All DBs
Position
1732851..1735091
Genome browser
AA seq
746 aa
AA seq
DB search
MASTNGYTRFFPYDEPFEGQREAMDRIYNALVRGQDVTFEGACGTGKTLAALAPALEHAR
ETDKTVVITTNVHQQQRQFVREARRITEQEPIQAVVFRGKGSMCHVDVDYQECQVLRDAT
RDLVDLEQEQAELERRADALQASAQAGEEDATEAYGAVTEELERVETELENLQDASTCEY
YRANLERDPAGFYQWLYDDVRTPDEIYERAEAAGFCGYELLKDGVDDVDLAICNYHHLLD
PQIREAFLRWLDCDPEDVIVVFDEAHNVADAAREHATRTCTENTLEQALDELEATPDPRS
DAAANVLAPFLAALRETYDENLGFGDVGEHWSDVAIDNDDRRDDLTLAFLQAYSGRGVED
DIEDALALGEELDSEYEEAFREGEASERQECQTLQAARFVDAWLEDAPEPGYYPTLGVRR
DQGTDEIYGRAELYACLPGSVTGDLSADAHATVLMSATLRPFDVLEDVLGLDDPATMAYG
LNFPEERRRTFAVDTPPLFSSDRDDPEVQATVAGALRDTVEFTPGNTLAFFPSYSEAERY
HELLTGERNLVGGATGDGSGSAADTITLDDGTTAYLDRAGTSAEDLRQRFVEDDHAVLFT
SLWGTLTEGVSFDGDDATSVAVVGVPYPHLDDRAKAVQEAYDLAFADRPVADPGWRYAVE
IPTVRKTRQALGRVLRSPEDLGVRVLLDRRYTAAGQGQLGQYSVHDTFPPEEREELIDVA
PGKLKFAIRNFYTDYAAYDGDPPIPE
NT seq
2241 nt
NT seq
+upstream
nt +downstream
nt
gtggcgtcgacgaacggctacacccgcttcttcccctacgacgaacccttcgagggccag
cgagaggcgatggaccggatctacaacgcgctggtccggggccaggacgtcaccttcgag
ggcgcctgcgggactgggaagacgctcgcggcgctcgcgccggcgctggagcacgcccgt
gaaaccgacaagaccgtcgtcatcacgacgaacgtccaccagcagcaacggcagttcgtc
cgcgaggcgcggcggatcaccgaacaggagcccatccaggccgtcgtattccgcgggaag
gggtcgatgtgccacgtcgacgtggactaccaggagtgtcaggtcctgcgggacgcgacg
cgggacctcgtcgacctggagcaggagcaggccgaactggaacggcgggctgacgcgctg
caggcgagcgcacaggccggcgaggaggatgcgacggaagcgtacggggcggtgaccgag
gaactcgaacgggtcgagaccgaactcgagaacctgcaggacgcctcgacctgcgagtac
taccgcgccaatctggagcgcgaccccgccggattctaccagtggctctacgacgacgtc
cgcaccccagacgagatctacgagcgcgcggaggccgcgggcttctgtggctacgaactc
ctcaaggacggcgtcgacgacgtcgacctggcgatctgtaactaccaccacctgctcgat
ccccagatccgcgaggcgttcctccgctggctcgactgcgaccccgaggacgtcatcgtc
gtcttcgacgaggcccacaacgtcgccgacgccgcccgggagcacgccacccggacctgc
accgagaacacgctcgagcaggcgctcgacgaactcgaggcgacgccggatccgcgcagc
gacgcggcggcgaacgtcctcgcaccgtttctcgccgccctccgcgagacctacgacgag
aatctcggtttcggcgacgtcggcgagcactggagcgacgtcgcgatcgacaacgacgac
cgtcgggacgatctcacgctggcgttcctccaggcctactccggccgcggcgtcgaggac
gacatcgaggacgcgctcgcgctgggcgaggaactcgactcggagtacgaggaggcattc
agagagggcgaggccagcgagcgacaggagtgccagacgctccaggcggcccggttcgtc
gacgcctggctcgaggacgctcccgaacccggctactacccgacgctcggggtgcgccgc
gatcagggcacggacgaaatctacggccgcgcggagctatacgcctgcctccccggctcc
gtcaccggcgacctctccgccgacgcccacgccaccgtcctcatgtcggccaccctccgg
cccttcgacgtgctcgaggacgtcctcggtctcgacgatccagcgacgatggcctacggg
ctgaacttccccgaggagcgccgccgcacgttcgccgtcgacaccccgccgctgttctcc
tcggaccgcgacgatcccgaagtccaggccacggtggctggcgccctgcgcgacaccgtc
gagttcacgcccggcaacacgctcgctttcttcccgagttacagcgaggccgagcgctac
cacgaactactgaccggcgagcgaaacctggtcggcggcgcgacgggggacgggagcggc
tcggcggctgacacgatcacgctcgacgacggcaccaccgcctacctcgatcgcgccggc
acgagcgcggaggacctccgccagcgcttcgtcgaggacgaccacgccgtcctgttcacg
tcgctgtggggcaccctcaccgagggcgtgagcttcgacggcgacgacgcgaccagcgtg
gcggtcgtcggcgtaccctatccgcacctcgacgaccgcgcgaaagccgtccaggaggcc
tacgacctcgccttcgcggatcgccccgtcgcggaccccggctggcgctacgccgtcgag
attcccaccgttcggaagacgcggcaggcactcgggcgcgtgctcagatcgccggaggat
ctgggcgtccgggtgctgctggatcggcgctataccgctgcggggcagggccagctcggg
cagtattcggtgcacgataccttcccgcccgaggagcgcgaggagctgatcgacgtcgcg
ccggggaagctgaagttcgcgatcaggaacttctacaccgactacgcggcgtacgacggg
gatccgccgattccggagtga
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integrated database retrieval system
