Salinarchaeum sp. Harcht-Bsk1: L593_10005
Help
Entry
L593_10005 CDS
T02693
Name
(GenBank) putative PAS/PAC sensor protein
KO
K06930
HTH-type transcriptional regulator, bacterioopsin transcriptional activator and related proteins
Organism
sali
Salinarchaeum sp. Harcht-Bsk1
Brite
KEGG Orthology (KO) [BR:
sali00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sali03000
]
L593_10005
Transcription factors [BR:
sali03000
]
Prokaryotic type
Helix-turn-helix
Other families
L593_10005
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAS_4
PAS_9
BAT
PAS
PAS_3
HTH_10
GAF_2
PAS_8
PAS_10
PAS_7
GAF
GAF_PdtaS
HTH_20
GAF_3
Diguanyl_cycl_sensor
PAS_GdpP
HTH_24
DUF7342
TrmB
Motif
Other DBs
NCBI-ProteinID:
AGN01946
UniProt:
R4W0C8
LinkDB
All DBs
Position
complement(2206996..2210724)
Genome browser
AA seq
1242 aa
AA seq
DB search
MASPSLTEALRETLSRFESLGEPRTTTEVADALDLGRRSTYERLERLVDRDRLETKKVGG
NGRVWWRPPATADVPPDWSATAASLIDDVLDGAEVGIFVLDEDFEVAWINDATERYFGLD
RDRVLGRDKRRLVEEQIAPVVDDSETFTDTVLATYDDNTSTEQFECRVTADDEARWLEHR
SKPVETGAYAGGRVELYYDVTTRTEVERARERDRAQFESVVDAVEEYAIVMLDPDGHVQT
WNEGAEQIMGYAAEDVVGEHFSTFYTDDAREAGVPEANLAAASSDGPVDDEGWRLRADGS
RYWATVTITAHRDDDGAIDGYVKVTRDMTERLEHERKLQHERDLLDQVQEASPIGIGIFD
TDGELYRGNRRFTELLGWNDADPSGYSLGEQPLLDADGDVIPYPERPAARALSTGDTVTD
QRIRVDGPDGRTRWLSVNAKPVGGEVDGVVVTMTDVTRLEGQARRLERQRDDLQHELEDV
FERIDDGFFALDADLQFEYVNERAGSLLDRSPSELVGTHVWDAVEAGSKAEAAFEEALET
QESVSFEEYYEPQETWFENHVYPSESGLSVYFEDITERKERERQLERQRELLRHTERLAG
TGGWETDVQTGNQRWTQGLFDMHDVDVDDPSQELVPTAEEYISMVAPEHRDAFRDAAERC
MTEGESYDEEIPITTAEDRERWIRTIGVPIHEDGDVVALRGAAQDITERKQRERELEEYR
RWSETLVENFPAGAVALVDRNLRYVTFAGTPEGDTDVTRTDLQGRRVRDALPEQIADTVV
PAYQAALDGDPSEFVDTIDDRVYQFHFVPVRDDDGEVFAATAMSQDITQRVEHQRQLEQQ
RESLAALNNLNSVVRDITEAVIEQSTREEIERTVCERLADSESYLFAWTGEVDPASQTVD
LRAEAGVEGYLDGVTISVDPDDERSEGPTGRAFRTGEPQVTQDIRADDRHDPWRDHVEQY
EIRSSAAIPIAHEGTVYGVINVYADRPQAFEGQELAVISRLGEVVGHAIASVERKQALMS
DELVELEFRIQDVFAGLDAPETDGTITFDQVVPVDDGEFLVYGTMAPDAVDTMTTLTEDL
PHWEQYTIRSDGDPMGFELRMTDPPVVGVVASHGGYVAQAAIEDSDYRMAIHLAPSVDTR
RIVDAVETAYSDAEMLRRRQISRVHEDRKDFQRNVVNDLTDRQRTALQTAYHAGFFEWPR
DTTGEEVAEAIGVASPTFHQHLRKAERKVLDAMFSSPLHSVG
NT seq
3729 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcaccgtccctgaccgaggcgctacgcgagacgctctcccgcttcgagagtctc
ggcgaaccgaggacgacgaccgaagtggcagatgcgcttgacctcggtcgtcggagcacc
tacgaacggctcgaacgactcgtcgaccgcgaccgcctcgaaaccaagaaggtcggtgga
aacggtcgcgtgtggtggcggccgccggcgacggccgacgtgcctcccgactggtcggcc
acggcagcgtccctgattgacgacgtcctcgacggcgccgaggtgggcatcttcgtcctc
gacgaggacttcgaggtcgcgtggatcaacgacgcgaccgaacgctacttcggcctcgac
cgggatcgcgttctcggccgggacaagcgccgtctcgtcgaggagcagatcgcgccggtc
gtcgacgacagcgagacgttcaccgacaccgtcctggcgacgtacgacgacaacacgtcc
accgagcagttcgagtgccgcgtgacggcggacgacgaagcgcgctggctcgaacaccgc
agcaagcccgtcgaaaccggcgcctacgccggcggccgcgtcgaactctactacgacgtc
accacccgaacggaggtcgaacgggcccgcgagcgggaccgcgcccagttcgagtccgtc
gtcgacgccgtcgaggagtacgccatcgtgatgctcgatcccgacgggcacgtgcagacc
tggaacgagggcgcagagcagataatggggtacgcggccgaggacgtcgtcggcgagcac
ttctcgacgttctacaccgacgacgcacgggaagccggggtccctgaagctaacctcgcc
gccgcgtcgagcgacgggccagtcgacgacgaggggtggcggctccgggccgacggctca
cgctactgggccaccgtgacgatcaccgctcaccgcgacgacgacggtgcgatcgacggg
tacgtgaaagtcactcgcgacatgaccgagcgcctcgaacacgaacggaaactccagcac
gaacgcgatctcctcgaccaggtgcaggaggcgagcccgatcggcatcggcatcttcgac
acggacggcgaactgtatcgggggaaccgacggttcacggagctactcgggtggaacgac
gccgatccgtcgggctattcactcggtgaacagccgctcctcgacgccgacggtgacgtg
atcccgtaccccgagcggccggcggcacgagcactctcgacgggtgacaccgtcacagac
cagcggatacgagtcgacggccccgacggccggacgcggtggctctcggtgaacgccaaa
cccgtcggcggtgaggtcgacggcgtcgtcgtcacgatgaccgacgtcacgcgactcgaa
ggccaggcccgtcgcctcgaacgccagcgcgacgacctccagcacgaactggaagacgtg
ttcgaacggatcgacgacgggttcttcgcgctcgacgccgacctccagttcgagtacgtc
aacgaacgggccgggtcgctcctggaccgctccccgtcggaactcgtcggaacgcacgtc
tgggacgcggtggaagccgggtcgaaggcggaggccgcattcgaggaggccctggagacg
caggagtcggtctcgttcgaagagtactacgagccccaggagacgtggttcgaaaaccac
gtctatccctccgagtcgggcctctccgtctacttcgaggatatcaccgaacgcaaggag
cgcgaacgccaactcgaacgccagcgagaactgctccggcacacggaacgactcgccggg
accggcgggtgggagacggacgtccagacggggaaccagcggtggacccagggactgttc
gacatgcacgacgtggacgtcgacgatccctcccaggagctggtcccgacggcggaggag
tacatctcgatggtggcccccgaacatcgggacgcgttccgggacgccgcagagcgctgt
atgacggagggcgaatcctacgacgaggagatccccatcaccaccgccgaggaccgcgag
cggtggattcggacgatcggcgtccccatccacgaggacggtgacgtcgtcgcgctccgc
ggtgctgcccaggacatcaccgagcgcaagcagcgcgagcgcgaactcgaggagtaccga
cgctggagcgaaaccctcgtcgagaacttccctgccggtgccgtcgccctcgtcgaccga
aacctgcggtacgtcaccttcgccggcacgccagaaggggacacggacgtgacgagaacc
gacctccaggggcggcgcgttcgcgacgcgttgccggaacagatcgcggacaccgtcgtc
ccggcataccaggccgccctcgacggcgacccgtccgaattcgtggacacgatcgacgac
agggtctatcagttccacttcgtcccggtacgcgacgacgacggcgaggtgttcgccgca
acggcgatgtcccaggacatcacccagcgagtcgagcaccagcggcaactcgaacagcag
cgcgaatccctcgccgcgctcaacaacctcaacagcgtcgtccgtgacatcaccgaggcg
gtcatcgagcagtccacccgcgaggagatcgaacggacggtctgtgaacgcctggccgac
tccgagtcctacctgttcgcctggaccggtgaggtggatcccgcgtcccagacggtggac
ctccgtgcagaggccggcgtcgaggggtacctcgacggggtcacgatctcggtcgatccc
gacgacgaacggagcgagggcccgacgggacgagcgttccggacgggagaaccgcaggtc
acccaggacatccgtgccgacgaccgccacgacccgtggcgcgaccacgtcgagcagtac
gagatccggtcgtcggccgcgatccccatcgcgcacgaaggaaccgtctacggagtgatc
aacgtgtacgctgaccggccgcaagccttcgagggacaggaactggcggtgatcagtcga
ctcggggaagtcgtcggccacgcgatcgccagcgtcgagcgcaagcaggcgctgatgagt
gacgaactcgtggagctggagttccggatccaggacgtgttcgccggactcgacgccccc
gagacggacgggacgataaccttcgatcaggtagtgccggtcgacgacggcgagttcctc
gtctacgggacgatggcgccagacgccgtcgataccatgacgacactcaccgaggacctc
ccgcactgggaacagtacaccatccggtccgacggcgatccaatgggcttcgaactccgg
atgaccgatccaccggtggtcggggtcgtggcatcacacggcggctacgtcgcgcaggcc
gccatcgaagacagcgactatcggatggcgatccacctcgcgccgagcgtcgacactcgg
cggatcgtcgacgccgtcgaaacggcctattcggacgccgagatgcttcgacgtcggcaa
atcagtcgggtccacgaggaccggaaggacttccagcgcaacgtcgtgaacgacctcacg
gaccgacagcgaacggcactacaaaccgcctaccacgctggctttttcgagtggccccgc
gacaccaccggcgaggaggtcgccgaggcgatcggggtggcgtcgcccacgttccatcaa
cacctccgcaaagccgagcggaaagtcctggacgcgatgttctcgtcgcccctccacagc
gtcggctag
DBGET
integrated database retrieval system
