Salinarchaeum sp. Harcht-Bsk1: L593_11235
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Entry
L593_11235 CDS
T02693
Name
(GenBank) tRNA splicing endonuclease
KO
K01170
tRNA-intron endonuclease, archaea type [EC:
4.6.1.16
]
Organism
sali
Salinarchaeum sp. Harcht-Bsk1
Brite
KEGG Orthology (KO) [BR:
sali00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sali03016
]
L593_11235
Enzymes [BR:
sali01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.16 tRNA-intron lyase
L593_11235
Transfer RNA biogenesis [BR:
sali03016
]
Prokaryotic type
tRNA spricing factors
tRNA splicing endonucleases
L593_11235
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GFIT
Motif
Pfam:
tRNA_int_endo
tRNA_int_endo_N
Motif
Other DBs
NCBI-ProteinID:
AGN02192
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Position
complement(2446661..2447704)
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AA seq
347 aa
AA seq
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MEARTEDGRVVIGGDARQRFYDARGYGYPLEGNEIAVSWVEAAHLLLRGDLDAVDGREFE
AFLRDGAGDVTGGDRAALTFLVYLDLRERGFYCSPAREGWIDDPTDVVDFVVYPRGKGPV
DDAVAYEVRVVGERESIPAADLGDCTLAIVDEESEVTYFETGRPSWEGTAAFEPGDPVDA
TLLADRAVCWDAPEALYGQAFYGQPLGKRDEGIDALQLSLVETAQLVAAGALDVEGGYDA
VVDRGRAVEGDRFDRRLQVYAALRERGVVPKTGFKFGADFRTYSAVESVDDLGHSERLVR
VVPGDFAFDPRDLALDVRLAHGVRKQLVVAWPEDASVEWVSIERLTP
NT seq
1044 nt
NT seq
+upstream
nt +downstream
nt
atggaggcccgcacggaggacggccgcgtcgtgatcggtggggacgcccgccagcgattc
tacgacgctcggggctacggctacccgctcgagggcaacgagatcgcggtctcctgggtc
gaagccgcccacctgctcctgcgcggtgacctcgacgccgtcgacggcagggagttcgaa
gcgttcctccgggacggcgccggggacgtgactggcggcgatcgagccgcgctcacgttc
ctggtctacctcgacttgcgcgagcggggattctactgttcgcccgcacgcgagggatgg
atcgacgacccgaccgacgtcgtcgacttcgtcgtctacccccgtggaaaggggcccgtc
gacgacgcagtcgcctacgaggtccgggtcgtcggcgaacgcgagtcgatccccgcggcc
gacctcggcgactgtaccctcgccatcgtcgacgaggagagcgaggtcacctacttcgag
accggacggccatcctgggagggcacggcggcgttcgagccgggcgacccggtcgacgcg
acgctcctggcggatcgggcggtgtgttgggacgcccccgaggcactctacggccaggcc
ttctacggccagccactcggaaagcgcgacgaggggatcgacgcactccagctatcgctc
gtcgagaccgcccagctcgtcgccgccggtgcgctcgacgtggagggcggctacgacgcg
gtcgtcgatcgcggtcgggccgtcgagggcgaccgcttcgaccgccggctgcaagtgtac
gccgcgttgcgcgaacgaggcgtcgttcccaagaccggcttcaagttcggcgcggacttc
cggacgtactccgcggtcgagtccgtcgacgacctcggccactccgagcgcctcgtccga
gtggtccccggcgacttcgcgttcgatccccgggatctcgccctcgacgtgcgactcgcc
cacggcgtccggaagcaactggtcgtcgcgtggcccgaggacgccagcgtcgaatgggtc
tcgatcgaacggctgacgccctga
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