Salinarchaeum sp. Harcht-Bsk1: L593_12215
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Entry
L593_12215 CDS
T02693
Name
(GenBank) putative helicase
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
sali
Salinarchaeum sp. Harcht-Bsk1
Brite
KEGG Orthology (KO) [BR:
sali00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sali03400
]
L593_12215
Enzymes [BR:
sali01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
L593_12215
DNA repair and recombination proteins [BR:
sali03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
L593_12215
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
AAA_30
AAA_22
DUF3052
Motif
Other DBs
NCBI-ProteinID:
AGN02386
UniProt:
R4W1C2
LinkDB
All DBs
Position
complement(2650174..2653881)
Genome browser
AA seq
1235 aa
AA seq
DB search
MREDASADEADVSLTDEQQDALKLDRNIAITAGAGTGKTTTLKERYREILASNPDIGPQN
VPTLTFTTDATSELRDEIRDVIDEELADATGDEYDRWRTAKDDLEDAYIHTIHAFCSRIL
REFAVEADVHPEFETLDEGDADDLLSETVTAVLDQYGVENGPPAPAGRLAPRDQNEQTHT
AEWPWDTHDELATLTQLYSRSTLHSALTSLFSERPDSTEWADRWADSTAEAYQAYCAEFI
DVSIPVTEADQLMDNQDAQTAIEEIRRIAAEDLDVPADDNGRELLEDLAGILTETRAHTD
DGTAADRQRFFLTLANGVTSNAGTLYSRSHYYAGTKGNWHGNGHETEQDALQDALDKLTA
LVEPEDRNLDHDPAVERNAARQAIALARVFQVTRAEYERRKRRRTALDYSDLITGAIDFL
ETNDDARRTLREEFEYIMVDEVQDTDPRQWQLIKLLSGDDPDRFDGQNVFLVGDEKQSIY
RFRDADVTQFRDARTTLIDDNPAGVDGDLELTGNFRTVAPTLDTINDLFEELLQPAGRED
DSTHEPYEAEPQRLTAERPDGPDVDGTVEYLVVPDDEDADAALGLEDTWFTDDEYLSRAE
REATAVTAHLTNLFAGDTEVYGPDAEEYVTAQPEHVALLFRSSRRLDAFERALDAENIPY
TNLAGSGFYDTPEVRPLINLLRVLEDPHADIPLYGVLRSPLFGFTDNELANAYTADTALW
NALETATPELQAAREQIREWRTDAGTGPDPAVGQWSALISRVIDDTAYLVSIGADDRPQQ
AVANVEKFRQQLRNWEEGNARSVTALLNRIQRARDGTDDPSEATIPGDIDGVQLRTIHSA
KGLEFPIVIVPEITRGFNHQSRITKAHFERINDEPLLGLKAPSIDTVFDDTNSAMYTHVR
EHYRDRERAEQRRLLYVAATRARDHLVLTGTHSIDDDTESGLSDAGDWADASSWQDWVQP
TMLDIPDLVPQLSQHDAITADLDEGQYTIRRPPEPGDWTPPGGDDAVPTDIELPEPARQP
AKQRLSASQFRDQLADTQSRPDLLQEDGGDGTGPEHIDADPAINSATLGTIVHKLCELTP
PREDWPTIIRRSVDDPDALTETDISLIERHADAGLTALDELEAMHEIRSRHAELTVTLDL
DAAKVVGDIDHLSVTDTGYLVADYKTSDLDGESIASYTEHYLPQLLAYAGALFQNDPDAE
HVTIALIFTDTGDVPHRTVTRIDVDELLDWASTEL
NT seq
3708 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgaagacgcttcagcggacgaagcggacgtgtcactcaccgacgagcagcaagac
gcgctgaaactcgaccggaacatcgcaatcacggccggcgccggcaccggcaaaacaacg
acgctcaaagaaaggtaccgggagatcctggcatccaacccggacatcgggccgcaaaac
gtcccgacgctcacgttcacgaccgacgcgaccagcgaactccgcgacgagatccgggac
gtgatcgacgaggaactcgccgacgccaccggcgacgagtacgaccggtggcggaccgcg
aaagacgatctcgaagacgcgtacatccacacgatccacgcgttctgcagccgcatcctc
cgcgagttcgccgtcgaagccgacgtccaccccgaattcgaaacgctcgacgaaggcgac
gcagacgacctgctgagcgagaccgtcacggccgtgctcgaccagtacggcgtcgaaaac
ggcccgccagcgccggccggacgcctcgccccacgcgaccagaacgagcaaacccacact
gcggaatggccgtgggacacgcacgacgagctcgccacgctcacccaactgtactcccga
tcgacactgcactcggcgctcaccagcctgttcagcgaacgcccggacagcaccgagtgg
gccgaccggtgggccgacagcaccgccgaagcatatcaagcgtactgcgcggagttcatc
gacgtctccatcccggtcaccgaggccgaccagctcatggacaaccaagacgcgcaaacc
gccatcgaagagatacgccgcatcgctgcggaggatctcgacgtcccggccgacgacaac
gggagggaactcctcgaggacctcgccggcatcctcaccgagactcgcgcgcacaccgac
gacggaaccgcagccgaccggcaacgattcttcctcaccctcgccaacggcgtcacgagc
aacgccggcaccctgtactcgagatcccactactacgcaggcaccaaagggaactggcac
gggaacggccacgaaaccgagcaagacgcgcttcaagacgcgctcgacaaactcaccgcg
ctcgtcgaacccgaagatcggaatctcgatcacgaccccgccgtcgaacggaacgctgcc
aggcaagccatcgcactcgcccgcgtcttccaggtcacccgcgccgagtacgaacgccgg
aaacgacgccgcaccgcactggactactccgacctcatcaccggcgccatcgacttcctc
gaaaccaacgacgacgcgcgccgcacactccgtgaggagttcgagtacatcatggtcgac
gaagtccaggacaccgacccgcggcaatggcagctcatcaaactgttaagcggcgacgac
cctgaccgattcgacgggcagaacgtgttcctcgtcggcgacgaaaaacagagcatctac
cggttccgcgatgccgacgtcacgcagttccgcgacgcccgcaccacgctcatcgacgac
aacccggccggcgtcgacggagacctcgaactcaccgggaacttccgcaccgtcgcaccc
accctcgacacgatcaacgacctgttcgaggaactcctccaacccgccggtcgggaagac
gacagcacccacgaaccgtacgaagccgagccgcaacgcctcaccgccgaacgcccggac
ggccccgacgtcgacggcaccgtcgagtacctggtcgtccccgacgacgaagacgcagac
gccgcgctcggcctcgaggacacgtggttcacggacgacgagtacctctcccgcgccgaa
cgcgaagccacggccgtcaccgcgcacctcacgaacctcttcgccggcgacaccgaggtg
tacggcccggacgctgaggaatacgtcaccgcgcaacccgagcacgtcgcactcctgttc
cgatcatcccgccgcctcgacgcgttcgaacgcgcactcgacgccgagaacatcccgtac
acgaacctcgccggcagcggcttctacgacacgccggaagtccgcccactcatcaacctg
ctccgcgtgctcgaagacccgcacgccgacatcccgctgtacggcgtcctgcgctccccg
ctgttcggcttcaccgacaacgaactcgccaacgcatacaccgccgacacggcactgtgg
aacgctctcgaaaccgcgacgcccgaactgcaagccgcccgcgagcagatccgcgagtgg
cgcaccgacgccggcaccggcccggacccggccgtcggacagtggagcgccctcatctcc
cgcgtcatcgacgacaccgcgtatctcgtcagcatcggtgccgacgaccgcccgcagcaa
gccgtcgccaacgtcgaaaaattccgccaacaactccgcaactgggaggaaggcaacgcc
cgatccgtcaccgcgctcctcaaccgaatccaacgcgcccgcgacggcaccgacgacccg
agcgaagcaaccatccccggcgacatcgacggcgtccagctccgcaccattcattccgcg
aaaggcctcgaattcccgatcgtgatcgttcccgagatcacccgcggattcaaccaccaa
tcacgcatcaccaaagctcacttcgaacgcatcaacgacgagcccctcctcggattgaaa
gcaccgagcatcgacaccgtgttcgacgatacgaactccgcgatgtacacgcacgtccgc
gaacactaccgcgaccgcgaacgcgccgagcaacgccgcctcctctacgtcgccgccaca
cgcgcccgcgaccacctcgtcctcaccggcacgcacagcatcgacgacgatacggaatct
ggattatccgacgccggcgactgggccgacgccagttcctggcaagattgggtccaaccc
acgatgctcgacatcccggacctcgtcccgcaactctcccagcacgacgcaatcaccgcc
gacctcgacgaagggcagtacacgatccgccgcccaccagaacccggcgactggacccca
ccaggcggagacgacgccgtcccaaccgacatcgaactccccgaacccgcccggcaaccc
gcgaaacaacgcctctcagcctcccaatttcgcgaccaactcgcagacacccaatcccgc
ccagatctcctccaggaagatggcggggacggaaccggacccgagcacatcgacgccgac
cccgccatcaacagtgccacgctcggcacgatcgtccacaaactctgcgaactcaccccg
ccacgcgaggactggccaaccatcattcgccgcagcgtcgacgatcccgacgcactcacc
gaaaccgacatcagcctcatcgagcgtcacgctgacgccggactcaccgcactcgacgag
ctcgaagctatgcacgagatccgctctcgtcacgccgaactcaccgtcacgctggacctg
gacgccgccaaagtcgttggcgacatcgatcacctctccgtcactgacacaggttacctc
gtcgccgactacaaaacaagcgacctcgacggcgaatccatcgcgagctacaccgagcac
tatctaccacagctcctcgcctacgccggcgcactcttccagaacgatccagacgccgag
cacgtcaccatcgccctcatcttcaccgacaccggcgacgtccctcaccggacggtaaca
cggatagacgtcgacgaactgctcgactgggcgagcacggaactgtaa
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