Salinarchaeum sp. Harcht-Bsk1: L593_12220
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Entry
L593_12220 CDS
T02693
Name
(GenBank) nuclease subunit B-like protein
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
sali
Salinarchaeum sp. Harcht-Bsk1
Brite
KEGG Orthology (KO) [BR:
sali00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sali03400
]
L593_12220
Enzymes [BR:
sali01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
L593_12220
DNA repair and recombination proteins [BR:
sali03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
L593_12220
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDDEXK_1
Motif
Other DBs
NCBI-ProteinID:
AGN02387
UniProt:
R4W6K8
LinkDB
All DBs
Position
complement(2653874..2657044)
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AA seq
1056 aa
AA seq
DB search
MVGGCICYSPSYTALRDHAFNWLDTNTAESPESAVFLESNAHQRDAIATAWREEHDALRL
TVTGIADFALTIHERLYGPYPGIETLERRRTIEQALHRLDENDVLRDAGQHTPSISELLR
ELEADGVRDIATLEDRLDSSTCTQHQQTVLTEVFEGYLELRGRIAHPESKTQNEKLAAVA
ETDQSLRTVLPHLDAIVISNLEDPSATELAVIERLAEDFPVRVLMPTVTPEAPTAGISTA
VADTIAALRGMGFEEERVEAADPLPLRDVTTRLYQPVETPDAPPAELSWHEAPTPDREIR
HVARRIREELATTDRQPDDLLVLAPGLLSYRDGIADVFDAYGIDHAYKVSILLERTYAGR
AVLDAIECCEYPRSDRIAELATNPLVDIPGTDAVELADVQRRLYTTAIDAYVDELDASAS
GIDAFLDRVAAVREAEADAVVPAVRELLGHIGLESTVETLDENADFNAGYEARAVRRVDA
ILESVQTVCEEFDPDDPLGEVGTALEGVRVPSPTQVTAGNVEIIGLQDAPGADFEELYVL
GATAQHLSGSETRPRFFQTLGEQLGVFERHAQRDVDRYRFGTLIGNAQRVHITTPETTID
DDPLLVSPFVDELARVTGLEPTGTLHDEPRASREDLQRDMAGAPPAALEPALAAARENGH
VTDAFVATATRGAECGAHRGVQELTAHDGQLTTGSIESLDGKLTRAPYSYSRLTKYAKCG
FKYLLSTGWGLDEEDDIEPGIDPLTLGSVVHETVETFYRDLQTEPGDPVDLTDHDQHDLE
QGLLAAARDAVDDEDVSLHDVFGEKTLHALFSGLASPTENEYYSPPGNDSTDDPSGTFAQ
FLDTELDFAEDGHRPSYFEAELGDDDGVQLPDGRTVPVGGIVDRVDTTPDGLTVFDYKAS
SVNGARRRENQARDGIDFQLPIYSLAAPELVDTDLTPSDVAARYYVINDNPQVKPRRSLA
DRFDDIDYDAFITDVIPDRLDAVTGAIENGAFHPAVVGERTAQCSYCEFSDICDVRHHRR
YDVVDHVTDTGHHAYVPAGAGAGDVLDELPGGDTDA
NT seq
3171 nt
NT seq
+upstream
nt +downstream
nt
atggttgggggatgcatctgctatagtccgtcctacactgcccttcgagatcacgccttc
aactggctcgatacgaacactgcagaatcaccagagagcgcagtatttctcgaatccaac
gcccaccagcgcgacgcgatcgctaccgcgtggcgcgaggagcacgatgcacttcgcctg
accgtcaccggaatcgccgatttcgcgctcacgattcacgagcgactgtacggcccgtat
cccggaatcgaaacgctcgaacgacgccgcacgatcgagcaagcgctccaccgactcgac
gagaacgacgtgcttcgcgacgccggccagcacacgccgtcgatttctgagctgttgcgg
gagctcgaagccgacggcgtccgagacatcgcaaccctcgaagatcgactcgattcgagt
acctgtacccagcaccagcaaacggttctcaccgaggtgttcgaagggtatctggagctt
cgcggacgcatcgcgcacccagagtcgaagacacaaaacgagaaactcgccgccgtcgca
gagaccgaccagtctttgaggactgtgctgccgcatctcgatgcgatcgtcatctctaat
ctcgaggacccgtcagcgaccgagctcgctgtcatcgagcggcttgcggaggacttcccc
gtccgcgtcctcatgccgaccgtcacgccggaagcaccgacggccggtatcagcacggcc
gtagctgacacgatcgctgcgctacgcggcatggggttcgaggaggaacgcgtcgaagca
gccgatccgctcccgcttcgagacgtcacgacacgcctgtaccagccagtcgagacgcct
gacgccccgcccgcggagctgtcctggcacgaagcgccgacaccggatcgagaaatccgt
cacgtcgcccggcgcatccgcgaggaactcgcaaccaccgatcggcagccagacgacttg
ctcgtactcgctcccgggttgctctcctaccgggatgggatcgcggacgtgttcgacgcg
tacggcatcgatcacgcgtacaaggtcagcatcctgctcgaacgaacgtacgccggccgc
gccgtcctggacgccatcgagtgctgtgagtacccgcgcagcgaccgcatcgcagaactg
gcaaccaacccgctcgtcgacatcccagggacggacgcggtcgaactcgcggacgtccag
cgccgcctgtacacgaccgcgatcgacgcgtatgtcgacgaactcgacgcgtccgcttcc
ggcatcgatgccttcctcgaccgcgtcgccgctgttcgggaggcggaggccgatgctgtt
gtcccggcagtccgcgagttgctcgggcatatcgggctcgaaagtacggtggagacgctc
gatgagaatgctgatttcaacgccgggtacgaggccagagccgtgcgtcgcgtcgacgca
atcctggagtccgtccagaccgtttgcgaggaattcgatcccgatgacccgctcggcgaa
gtcgggacagcactcgaaggtgtccgcgttccgtcgccaacccaggtgactgccgggaac
gtcgaaatcatcggactccaggacgcgccgggcgcggatttcgaggaactgtatgtgctc
ggtgcgacggcacagcacctctccggtagcgaaacgcgcccacggttcttccaaactctg
ggcgagcaactcggcgtgttcgaacgccatgcgcaacgagacgtggaccggtaccggttc
gggacgctcatcgggaacgcacagcgcgtccacatcacgacaccagaaacgacgatcgac
gacgatccgttactcgtctcaccgttcgtcgacgaactcgcccgcgtcaccggcttggaa
ccgactggaacccttcacgacgagccacgcgcatcgagagaagacctgcaacgcgacatg
gccggcgcacctccggcagcgctagaaccagccctcgcagcagctcgagagaacgggcac
gtcaccgacgcgttcgttgcaactgcgacgcgcggcgcggaatgcggcgcgcaccgcggc
gtccaggaactcaccgcccacgacgggcaactcacaacgggatcgatagaatcgctggac
gggaagctgacgcgcgcgccgtacagttacagtcgcctcacgaagtacgccaagtgcggg
ttcaaatacctcctcagcaccgggtggggtctcgacgaggaggacgacatcgaaccaggc
atcgacccgttgacgctcggctcggtcgtccacgaaaccgtcgaaacattctaccgcgac
ctccaaaccgaacccggcgaccccgtcgacctgaccgaccacgaccagcatgatctcgag
caaggcctcctcgccgcggcacgagacgccgtcgacgatgaagacgtctcgctgcacgac
gtgttcggcgagaaaaccctgcacgcactgttcagcggcctggcctccccgaccgaaaac
gagtactactccccgccgggcaacgacagcaccgacgacccttccggcacgttcgcgcag
ttcctcgacacggaactcgacttcgccgaagacgggcaccgacccagctacttcgaagca
gaactcggcgacgacgacggcgtgcaactcccggacggccgcaccgttccagtcggcggg
atcgtcgaccgcgtcgacaccacgcccgacggactcaccgtcttcgactacaaagcatcc
agcgtcaacggggcacgacgacgagaaaaccaggcgcgcgacgggatcgacttccaactc
ccaatctactcactcgccgccccggaactcgtcgacaccgacctcaccccgtccgacgtc
gccgcacggtactacgtcatcaacgacaacccgcaggtcaaaccgcggcgcagcctcgcc
gaccggttcgacgacatcgactacgacgcgttcatcaccgacgtgatcccggaccgactc
gacgcggtcacaggagcgatcgagaatggcgcgttccacccggctgtcgtcggtgaacgc
actgcacagtgctcctactgcgagttcagcgacatttgcgacgttcgacaccaccgccga
tacgacgtggtcgatcacgtcaccgacaccgggcaccacgcgtacgttcccgcgggcgcc
ggcgcaggggacgtgctggacgaacttcctgggggtgacaccgatgcgtga
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