Salinarchaeum sp. Harcht-Bsk1: L593_14665
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Entry
L593_14665 CDS
T02693
Name
(GenBank) transcription factor TFIIB cyclin-related protein
KO
K03124
transcription initiation factor TFIIB
Organism
sali
Salinarchaeum sp. Harcht-Bsk1
Pathway
sali03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
sali00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
L593_14665
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sali03021
]
L593_14665
Transcription machinery [BR:
sali03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
L593_14665
Prokaryotic type
Archaeal type
TFB
L593_14665
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Trm112p
Cyclin_C
Zn_ribbon_RRN7
Zn_ribbon_Elf1
DNA_ligase_ZBD
Zn_ribbon_LysW
Zn_ribbon_PaaD
HTH_Tnp_ISL3
A2L_zn_ribbon
DUF7129
DZR
Cyclin_N
HypA
Sigma70_r4
Zn_ribbon_tTFIIB
Cas12f1-like_TNB
Zn_ribbon_3
Zn_ribbon_Top1
Zn_ribbon_RPB9
Auto_anti-p27
DUF7575
Motif
Other DBs
NCBI-ProteinID:
AGN02869
LinkDB
All DBs
Position
complement(3147695..3148663)
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AA seq
322 aa
AA seq
DB search
MSDGRRTRERERDETESETESVDETVQCPECGGKLVNDEEHGETVCQDCGLVVETDEIDR
GPEWRAFDSREKDEKSRVGAPTTKMMHDEGLSTNIGWQDKDAYGRQLSSRQREKMQRLRT
WNERFRTRDSKERNLKQALGEIDRMASALGLPENVRETASVIYRRALAEDLLPGRSIEGV
ATASLYAAARQAGTPRSLDEITAVSRVEKDEIARTYRYVVRELGLEIKPADPEQYVPRFV
SELGLSEEVERRARKLLKTAKSEGIHSGKSPVGLAAAAVYAASLLTNEKVTQNEVSRVAN
ISEVTIRNRYHELLEAEGAIAG
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
atgtcagacggacgtagaacccgcgaacgggagcgtgacgagaccgagtccgaaacagaa
tccgtcgacgagacggtccagtgtccggagtgtggcggcaagctcgtcaacgacgaggaa
cacggcgaaaccgtctgtcaggattgcggactggtcgtcgaaactgacgagatcgaccgc
ggcccggagtggcgcgcgttcgactcccgcgagaaggacgagaagagccgcgtcggcgcc
cccacgacgaagatgatgcacgacgaggggctctcgacgaacatcggctggcaggacaag
gacgcctacgggcgccagctctccagccggcagcgcgaaaagatgcagcgcctgcgcacc
tggaacgagcgcttccgcacgcgtgactcgaaggagcgcaatctcaagcaggcgctcggc
gagatcgaccggatggcgtccgcgctcggtctccccgagaacgtccgcgagaccgcgagt
gtgatctaccggcgtgcgctcgccgaggacctccttccaggtcggtcgatcgagggcgtc
gcgaccgcgagcctgtacgccgctgcacgacaggccgggactccccgcagcctcgacgaa
atcacggcggtctcccgcgtcgagaaggacgagatcgcacgaacgtaccgctacgtcgtc
cgcgaacttggtctagagatcaaacccgccgacccggagcagtacgtcccgcgattcgtt
tcggaactcggcctctcagaagaggtcgaacgccgtgccaggaagctcctgaagacggcc
aagagcgagggcatccacagcggcaagtcgccggtcggcctcgccgcggcggccgtctac
gctgcatcgttgctcaccaacgagaaggtcacccagaacgaggttagccgggtcgcgaac
atctccgaggtcacgatccggaaccggtaccacgagctgctcgaggcggaaggcgcaatc
gcgggctga
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