Streptomyces albireticuli: SMD11_2004
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Entry
SMD11_2004 CDS
T05230
Symbol
hupB
Name
(GenBank) DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
salj
Streptomyces albireticuli
Brite
KEGG Orthology (KO) [BR:
salj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
salj03032
]
SMD11_2004 (hupB)
03036 Chromosome and associated proteins [BR:
salj03036
]
SMD11_2004 (hupB)
03400 DNA repair and recombination proteins [BR:
salj03400
]
SMD11_2004 (hupB)
DNA replication proteins [BR:
salj03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
SMD11_2004 (hupB)
Chromosome and associated proteins [BR:
salj03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
SMD11_2004 (hupB)
DNA repair and recombination proteins [BR:
salj03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
SMD11_2004 (hupB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
Motif
Other DBs
NCBI-ProteinID:
ARZ67661
UniProt:
A0A1Z2L0D5
LinkDB
All DBs
Position
complement(2366495..2367217)
Genome browser
AA seq
240 aa
AA seq
DB search
MNKAQLVEAIADKLGGRQQAADAVDAVLDAIVRAVVAGDRVSVTGFGSFEKVDRPARYAR
NPQTGERVRVKKTSVPRFRAGQGFKDLVSGSKKLPKNDVAVKKAPKGSLSGGTKTTAKAA
AKKATAKKATAKKATTATTAKKTTAKTAVKKTTTAAAKKATATTKKAAAKKATPAKKTTA
AATKAAAAKKATPAKKTTATAKKATAKKTAPAAKKATATKAPARKTTARKTTAKKAAAKK
NT seq
723 nt
NT seq
+upstream
nt +downstream
nt
gtgaacaaggcgcagctcgttgaagcgattgccgacaagctcggcggccgtcagcaggcc
gcagacgccgtcgacgcggtgctcgacgcgatcgtccgtgcggttgtcgccggcgaccgg
gtctcggtcaccggcttcggctcgttcgagaaggtcgaccgcccggcccgttacgcccgc
aacccgcagacgggtgagcgcgtgcgggtcaagaagacctcggtgccgcgcttccgcgcg
ggtcagggcttcaaggacctggtgagcggctcgaagaagctgccgaagaacgacgtcgcg
gtgaagaaggcgcccaagggcagcctttcgggcggcaccaagaccaccgccaaggccgcg
gccaagaaggccaccgccaagaaggccacggcgaagaaggccaccacggccaccaccgcc
aagaagaccacggcgaagaccgcggtcaagaagaccacgacggcggccgcgaagaaggcc
accgccaccaccaagaaggccgcggcgaagaaggccacgccggccaagaagacgacggcc
gccgccaccaaggccgccgccgccaagaaggccacgccggccaagaagaccacggccacg
gcgaagaaggcgaccgccaagaagacggcgcccgccgccaagaaggccacggcgaccaag
gctccggcgcgcaagaccaccgcgcgcaagaccaccgccaagaaggccgccgccaagaag
taa
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