KEGG   Streptomyces albireticuli: SMD11_2004
Entry
SMD11_2004        CDS       T05230                                 
Symbol
hupB
Name
(GenBank) DNA-binding protein
  KO
K03530  DNA-binding protein HU-beta
Organism
salj  Streptomyces albireticuli
Brite
KEGG Orthology (KO) [BR:salj00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:salj03032]
    SMD11_2004 (hupB)
   03036 Chromosome and associated proteins [BR:salj03036]
    SMD11_2004 (hupB)
   03400 DNA repair and recombination proteins [BR:salj03400]
    SMD11_2004 (hupB)
DNA replication proteins [BR:salj03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    SMD11_2004 (hupB)
Chromosome and associated proteins [BR:salj03036]
 Prokaryotic type
  Nucleoid associated proteins
   HU (heat unstable protein)
    SMD11_2004 (hupB)
DNA repair and recombination proteins [BR:salj03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Supressor
      SMD11_2004 (hupB)
SSDB
Motif
Pfam: Bac_DNA_binding
Other DBs
NCBI-ProteinID: ARZ67661
UniProt: A0A1Z2L0D5
LinkDB
Position
complement(2366495..2367217)
AA seq 240 aa
MNKAQLVEAIADKLGGRQQAADAVDAVLDAIVRAVVAGDRVSVTGFGSFEKVDRPARYAR
NPQTGERVRVKKTSVPRFRAGQGFKDLVSGSKKLPKNDVAVKKAPKGSLSGGTKTTAKAA
AKKATAKKATAKKATTATTAKKTTAKTAVKKTTTAAAKKATATTKKAAAKKATPAKKTTA
AATKAAAAKKATPAKKTTATAKKATAKKTAPAAKKATATKAPARKTTARKTTAKKAAAKK
NT seq 723 nt   +upstreamnt  +downstreamnt
gtgaacaaggcgcagctcgttgaagcgattgccgacaagctcggcggccgtcagcaggcc
gcagacgccgtcgacgcggtgctcgacgcgatcgtccgtgcggttgtcgccggcgaccgg
gtctcggtcaccggcttcggctcgttcgagaaggtcgaccgcccggcccgttacgcccgc
aacccgcagacgggtgagcgcgtgcgggtcaagaagacctcggtgccgcgcttccgcgcg
ggtcagggcttcaaggacctggtgagcggctcgaagaagctgccgaagaacgacgtcgcg
gtgaagaaggcgcccaagggcagcctttcgggcggcaccaagaccaccgccaaggccgcg
gccaagaaggccaccgccaagaaggccacggcgaagaaggccaccacggccaccaccgcc
aagaagaccacggcgaagaccgcggtcaagaagaccacgacggcggccgcgaagaaggcc
accgccaccaccaagaaggccgcggcgaagaaggccacgccggccaagaagacgacggcc
gccgccaccaaggccgccgccgccaagaaggccacgccggccaagaagaccacggccacg
gcgaagaaggcgaccgccaagaagacggcgcccgccgccaagaaggccacggcgaccaag
gctccggcgcgcaagaccaccgcgcgcaagaccaccgccaagaaggccgccgccaagaag
taa

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