Streptomyces albireticuli: SMD11_2275
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Entry
SMD11_2275 CDS
T05230
Name
(GenBank) RNA polymerase sigma factor
KO
K03090
RNA polymerase sigma-B factor
Organism
salj
Streptomyces albireticuli
Brite
KEGG Orthology (KO) [BR:
salj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
salj03021
]
SMD11_2275
Transcription machinery [BR:
salj03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
SMD11_2275
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
HTH_Crp_2
DUF7343
MarR_2
GerE
HTH_AsnC-type
HTH_24
MarR
HTH_23
HTH_3
HTH_28
HTH_37
KORA
Motif
Other DBs
NCBI-ProteinID:
ARZ67926
UniProt:
A0A1Z2L0Z0
LinkDB
All DBs
Position
complement(2682100..2682978)
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AA seq
292 aa
AA seq
DB search
MTITASTVATERSTAASQRFEASVGGLPYIEDATTVAPRDARELSRLFFDRLAELEEGTH
AYQYARNTLIEINLSLVRFAASRFRSRGDQMEDIIQVGTIGLIKAIDRFDLSREVEFTTF
AVPYIVGEIKRHFRDTSWSVHVPRRLQELRVELAKATGELSQELDHSPTPDELAAHLGLS
REEVVEGIVASNGYTAGSIDVPVDEGSDQVGNSFADRLGDVDPALEGVENLQALKPLVAE
LDDRDRQILRMRFGGEMTQSEIGAELGISQMHVSRLLTRILGRLRVGLLGAR
NT seq
879 nt
NT seq
+upstream
nt +downstream
nt
gtgaccatcacggcatccacggttgcgacggagcgttcgacggctgcctcgcagcggttc
gaggcatcggtcggggggctgccgtacatcgaggacgcgaccacggtggcgccacgggac
gcccgcgaactgtcgcggctcttcttcgaccggctcgccgagctggaggaggggacccac
gcctaccagtacgcccgtaacaccctgatcgagatcaacctctcgctggtgcgcttcgcc
gcctcccgcttccgcagccggggcgaccagatggaggacatcatccaggtcggcacgatc
ggcctgatcaaggcgatcgaccgcttcgacctgtcgcgggaggtggagttcaccaccttc
gccgtgccgtacatcgtcggtgagatcaagcgccacttccgtgacacgagctggtccgtg
cacgtgccccggcgcctccaggaactccgggtcgagctggccaaggccaccggcgagctc
tcccaggaactggaccactcgccgacccccgacgagctcgccgcgcacctcgggctgagc
cgcgaggaggtcgtcgagggcatcgtggccagcaacggctacaccgccggctcgatcgac
gtgcccgtggacgagggctccgaccaggtcggcaacagcttcgccgaccggctcggcgac
gtcgaccccgccctggagggcgtcgagaacctgcaagcactcaaaccgctggtcgccgag
ctcgacgaccgggaccggcagatcctgcggatgcggttcggcggggagatgacgcagtcg
gagatcggggcggagctggggatctcgcagatgcatgtgtcgcggctgctgacgcggatt
ctggggcggttgcgggtggggttgctgggagctcggtag
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