Streptomyces albireticuli: SMD11_2365
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Entry
SMD11_2365 CDS
T05230
Symbol
uvrD
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
salj
Streptomyces albireticuli
Pathway
salj03420
Nucleotide excision repair
salj03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
salj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
SMD11_2365 (uvrD)
03430 Mismatch repair
SMD11_2365 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
salj03400
]
SMD11_2365 (uvrD)
Enzymes [BR:
salj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
SMD11_2365 (uvrD)
DNA repair and recombination proteins [BR:
salj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
SMD11_2365 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
SMD11_2365 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PDDEXK_1
UvrD_C_2
AAA_30
Motif
Other DBs
NCBI-ProteinID:
ARZ68014
UniProt:
A0A1Z2L157
LinkDB
All DBs
Position
complement(2776588..2780064)
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AA seq
1158 aa
AA seq
DB search
MDAVTPRLTDPEQLKELLGIPFTPEQTACITAPPAPQVIVAGAGSGKTTVMAARVVWLVG
TGQVAPEQVLGLTFTNKAAGELSERVRKALAEAGVTGSAEVPADPDQAPGDPQISTYHAF
AGRLLKEHGLRIGLEPGTRLLADATRFQLAARVLRTSPGPYPALTRSFGDLVPDLLALDG
ELAEHLVRPEELRAHDTALLAALEGARLSNADLRKIPEAARARLELLELVEAYRREKARR
DLLDFGDQIARSAELALTRPEVGRILREQFAVVLLDEYQDTSVAQRLLLSGLFGGGTGHA
VTAVGDPCQAIYGWRGASVANLDDFPLHFPYADGRPAQRFALSENRRSGGRLLGLANGLA
AELRARHEGVEALRPAPGAEREGVVRCALLPTHAEELDWLAESLAHLVRTGTRPGDIAVL
CRTATDFAEIQAALVERDLPVEVVGLSGLLHLPEIADLVAVCEVLQDPTANAALVRLLIG
PRWRIGARDLALLGRRARTLVPYGSTGSDPDRRLAEAVEGVDPAEVISLADALDTFLLAE
GADDGLPFSADARVRFARLAAELRDLRRALADPLMDVLHRVLATTGLEVELSASPHALAA
RRRETLAQFLDIAAGFAAVDGEATLLAFLGFLRTAAQYEKGLDSSLPGGENTVKVLTAHK
SKGLEWDVVAVPGLVTRTFPSEQARESWTAQAKVLPHALRGDADTLPEAGEGGWDAKGMA
AFKAAMKEHQRIEELRLGYVTFTRPRSLLLGSGHWWGPSQKKPRGPSAFLEALRAHCEAG
HGEIEVWAGAPEEGAENPALDEQDTDRSWPLPLDPASFARRTEAAAAVRAHLDRLAEEPL
DAAGETRPAHDPDWPPPPEDDPEGEEYGPFEPFEEEPEPADWDALATVRPAGTPATAPDV
VLPAPRQAPPQPPRPPAGSSLTPEEARLAGSWDRDLDALAGELRRARARVRDVALPSSLS
ATQLVRLAADPDGFARELARPMPRPPQPAARRGTRFHAWVESRFEALPLPLLGPDELPGA
DDDAYDGPGQEITDERDLAALKEAFERTPYARRTPYRVEVPFQLTLSGRVIRGRIDAVYR
ERGPEGDTFEIVDWKTGRTQDADPLQLAIYRVAWAELHGLPLSSVTAAFVYVRDGETVHP
AGLPDRAGLEELLLGERR
NT seq
3477 nt
NT seq
+upstream
nt +downstream
nt
gtggatgccgtgaccccgcgcctgaccgaccccgagcagctcaaggagctcctcggcatc
ccgttcaccccggagcagacggcctgcatcaccgcgccgcccgccccgcaggtcatcgtg
gccggcgccgggtccggcaagaccacggtgatggccgcccgggtggtctggctggtcggc
accggacaggtcgcgcccgagcaggtcctcggcctgacgttcaccaacaaggcggccggc
gagctgtccgagcgggtgcgcaaggccctcgccgaggcgggcgtcaccggctccgccgag
gtccccgccgaccccgaccaggcccccggcgacccccagatctccacctaccacgccttc
gccgggcgcctcctcaaggagcacggcctgcgcatcggcctggagcccggcacccggctg
ctcgccgacgccacccgcttccagctcgccgcccgggtcctgcgcacctcgcccggcccc
tacccggcgctcacccgctccttcggcgacctcgtccccgatctcctcgcgctcgacgga
gagctcgccgagcacctcgtacggcccgaggagctccgcgcccacgacaccgcgctgctg
gccgccctggagggcgcccggctctccaacgccgacctgcgcaagatccccgaggccgcc
cgcgcccgcctcgaactcctggagctggtcgaggcctaccgccgcgagaaggcccgccgg
gatctcctggacttcggcgaccagatcgcccgctccgccgagctcgccctcacccgcccc
gaggtcggccgcatcctgcgcgagcagttcgccgtcgtcctcctcgacgagtaccaggac
acctccgtcgcccagcggctcctgctgtccggcctcttcggcggcggcacgggccacgcc
gtcaccgccgtcggcgacccctgccaggccatctacggctggcgcggcgcctccgtggcc
aacctcgacgacttcccgctccacttcccgtacgccgacggccgccccgcccagcggttc
gcgctcagcgagaaccgccgcagcggcggccgcctcctcggcctggccaacggcctggcc
gccgagctccgcgcccgccacgagggcgtcgaggcgctgcggccggcccccggcgccgag
cgggagggggtggtgcgctgcgccctgctgcccacccacgccgaggagctggactggctc
gcggaatccctcgcccacctggtgcgcacgggcacccgccccggcgacatcgcagtcctg
tgccgcaccgccacggacttcgcggagatccaggccgcgctcgtggagcgcgacctgccc
gtggaggtcgtcggcctctccggcctgctgcacctgcccgagatcgccgacctcgtcgcc
gtctgcgaggtgctccaggaccccacggccaacgccgcgctcgtccggctcctgatcggc
ccgcgctggcggatcggcgcccgcgacctcgccctgctgggccgccgcgcccgtacgctc
gtgccttacggcagcacgggatccgatcccgaccgcaggctcgccgaggccgtggaaggc
gtcgaccccgccgaggtgatctccctcgccgacgccctcgacaccttcctgctggccgag
ggcgccgacgacggcctgccgttctcggccgacgcccgcgtccgcttcgcccgcctcgcg
gcggagctgcgcgacctgcggcgcgcgctggccgacccactcatggacgtcctccaccgg
gtgctcgccaccaccggcctggaggtcgagctctcggcgtcgccgcacgccctggccgcc
cgccggcgcgagaccctcgcgcagttcctggacatcgccgcgggcttcgccgccgtcgac
ggcgaggccacgctcctggccttcctcggcttcctgcgcaccgccgcgcagtacgagaag
ggactcgacagctccctgcccggcggcgagaacaccgtcaaggtcctcaccgcccacaag
tccaagggcctggagtgggacgtggtcgccgtccccggcctcgtcaccaggacgttcccc
agcgagcaggcccgcgagtcctggacggcccaggccaaggtcctcccgcacgccctgcgc
ggcgacgccgacaccctgcccgaggccggggagggcggctgggacgccaagggcatggcc
gccttcaaggccgccatgaaggaacaccagcggatcgaggagctccgcctcggctacgtc
accttcacccgtccccggtcgctgctgctgggctccggccactggtggggccccagccag
aagaagccccgcggcccgtccgccttcctggaggccctgcgcgcgcactgcgaggcgggc
cacggcgagatcgaggtctgggccggcgccccggaggagggcgccgagaaccccgccctg
gacgagcaggacacggaccgctcctggccgctgcccctggacccggcgtccttcgcgcgc
cgtaccgaggccgcggccgccgtccgggcgcacctcgaccgcctggcggaggagcccctc
gacgcggcgggggagacgcggcccgcccacgaccccgactggccgcccccgcccgaggac
gacccggagggtgaggagtacggccccttcgagcctttcgaggaggagccggagcccgcc
gactgggacgccctggcgaccgtccggcccgccggcaccccggccaccgccccggacgtc
gtgctgcccgccccccggcaggccccgccccagccgccccgcccgccggcggggagctcc
ctgacgcccgaggaggcccggctggccggctcctgggaccgcgatctggacgccctcgcg
ggcgagctgcgcagggcacgcgcgcgcgtgcgcgacgtggccctgccgtcgtccctcagc
gccacccagctcgtccgcctcgccgccgacccggacggcttcgcgcgggagctggcccgg
cccatgccccggccgccgcagcccgccgcgcgccgcggcacccgcttccacgcctgggtc
gagtcccgcttcgaggcgctgccgctgcccctgctcggccccgacgaactgccgggcgcc
gacgacgacgcgtacgacgggcccggccaggagatcaccgacgagcgggacctcgccgcg
ctcaaggaggccttcgagcgcaccccgtacgcccgccgcaccccttaccgcgtggaggtg
cccttccagctcaccctctcgggccgagtgatccgcggccgcattgacgccgtctaccgc
gagcgcggccccgagggcgacaccttcgagatcgtcgactggaagaccggccgcacccag
gacgcggaccccctccagctcgcgatctaccgcgtcgcctgggccgaactccacggcctg
cccctgtcgtcggtcaccgccgccttcgtctacgtgcgcgacggcgagaccgtccacccc
gccggcctgcccgaccgggcgggcctggaggaactcctgctcggggagcggcgttga
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