Streptomyces albireticuli: SMD11_2709
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Entry
SMD11_2709 CDS
T05230
Symbol
uvrD
Name
(GenBank) ATP-dependent DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
salj
Streptomyces albireticuli
Pathway
salj03420
Nucleotide excision repair
salj03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
salj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
SMD11_2709 (uvrD)
03430 Mismatch repair
SMD11_2709 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
salj03400
]
SMD11_2709 (uvrD)
Enzymes [BR:
salj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
SMD11_2709 (uvrD)
DNA repair and recombination proteins [BR:
salj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
SMD11_2709 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
SMD11_2709 (uvrD)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
AAA_11
ResIII
DEAD
Peptidase_M43
Motif
Other DBs
NCBI-ProteinID:
ARZ68358
LinkDB
All DBs
Position
complement(3162074..3164539)
Genome browser
AA seq
821 aa
AA seq
DB search
MSSLFDDSFLADLGPADEEHPPPPEDAAPERVPDDLFGGAFDAPVPREAYYRDGAARPVV
DPAALLEGMNDQQRAAVVHTGSPLLIVAGAGSGKTRVLTHRIAHLLGARHVHPGQILAIT
FTNKAAGEMKERVEELVGPRANAMWVMTFHSACVRILRRESKKLGFTSSFSIYDAADSKR
LMALVCRDLDLDPKKFPPKSFSAKISNLKNELIDEEDFAARAADGFEKTLAQAYVMYQSR
LREANALDFDDIIMTTVHLLQAFPDVAEHYRRRFRHVLVDEYQDTNHAQYTLVRELVGTA
GSVPDLDPAELCVVGDADQSIYAFRGATIRNILQFEEDYPDATTILLEQNYRSTQTILSA
ANAVIERNQNRRPKNLWTEAGEGAGITGYVADTEHDEAQFVADEIDRLTDAGDAKAGDVA
VFYRTNAQSRVFEEIFIRVGLPYKVVGGVRFYERKEVRDVLAYLRVLANPEDTVPLRRIL
NVPKRGIGERAEAMIDALSQRERISFPQALRRVDEAYGMAARSTNAVKRFNVLMEELRTI
VESGAGPATVLEAVLERTGYLAELQASTDPQDETRIENLQELAAVALEFEQEREEESPGT
LADFLEKVALVADSDQIPDEDTEGTGVITLMTLHTAKGLEFPVVFLTGMEDGVFPHMRAL
GQTKELEEERRLAYVGITRARERLYLTRASMRSAWGQPSYNPPSRFLEEIPEKYVQWRRT
GPATPSATMGTVSSSFSSSRSGGTSTGFGGGKAGPSGFATRRTKDRPVVALAVGDRVTHD
SFGLGTVVGVKGSGDNAEATVDFGEEKPKRLLLRYAPVEKL
NT seq
2466 nt
NT seq
+upstream
nt +downstream
nt
atgagcagcctctttgacgacagcttcctggcggacctcggccctgcggacgaggagcac
ccgcctcccccggaggacgcggcccccgagcgggtgccggacgacctcttcggcggtgcc
ttcgacgcccccgtgccccgggaggcctattaccgcgacggcgcggcccgccccgtcgtg
gacccggccgccctgctggaggggatgaacgaccagcagcgcgccgccgtcgtgcacacg
ggctccccgctgctgatcgtcgccggcgccggctccggcaagacccgggtgctcacccac
cgcatcgcccacctgctcggcgcgcgccacgtccaccccggccagatcctcgcgatcacg
ttcaccaacaaggccgcgggcgagatgaaggagcgcgtcgaggagctcgtcggcccccgc
gccaacgccatgtgggtgatgacgttccacagcgcgtgcgtgcggatcctgcgccgcgag
agcaagaagctgggcttcacctcctccttctcgatctacgacgcggcggactcgaagcgc
ctcatggcgctcgtctgccgcgacctggacctcgaccccaagaagttcccgccgaagtcc
ttcagcgccaagatctccaacctgaagaacgagctgatcgacgaggaggacttcgcggcg
cgggcggccgacggcttcgagaagacgctcgcccaggcgtacgtgatgtaccagtcgagg
ctccgcgaggccaacgccctcgacttcgacgacatcatcatgaccacggtccacctcctc
caggccttcccggacgtggccgagcactaccgccgccgcttccgccacgtcctggtcgac
gagtaccaggacaccaaccacgcgcagtacaccctggtgcgcgagctggtcggcacggcg
ggcagcgtcccggacctcgaccccgccgagctgtgcgtcgtgggcgacgccgaccagtcg
atctacgccttccgcggcgccaccatccggaacatcctccagttcgaggaggactacccg
gacgccaccacgatcctgctggagcagaactaccgctccacgcagacgatcctcagcgcc
gccaacgccgtcatcgagcggaaccagaaccgccgcccgaagaacctgtggaccgaggcc
ggcgagggcgcgggcatcaccggctacgtcgcggacaccgagcacgacgaggcccagttc
gtcgccgacgagatcgaccgcctgacggacgcgggcgacgccaaggcgggcgacgtcgcc
gtcttctaccgcaccaacgcccagtcgcgtgtcttcgaagagatcttcatccgcgtcggc
ctgccctacaaggtcgtcggcggcgtgcgcttctacgagcgcaaggaggtccgcgacgtc
ctggcctacctgcgcgtcctcgccaaccccgaggacaccgtgcccctgcggcgcatcctc
aacgtccccaagcgcggcatcggcgagcgcgccgaggccatgatcgacgccctgtcgcag
cgggagcggatcagcttcccgcaggcgctgcgccgcgtcgacgaggcgtacggcatggcg
gcccgctcgaccaacgccgtcaagcgcttcaacgtcctcatggaggagctccgcacgatc
gtcgagtcgggcgccggcccggccacggtcctggaggccgtcctggagcgcacgggctac
ctcgccgagctccaggcctccaccgacccgcaggacgagacccgcatcgagaacctccag
gagctcgccgcggtggccctggagttcgagcaggagcgcgaggaggagagcccgggcacg
ctcgcggacttcctggagaaggtcgcgctggtcgccgactccgaccagatcccggacgag
gacaccgagggcaccggcgtcatcacgctgatgaccctgcacaccgcgaagggcctggag
ttccccgtcgtcttcctcacgggcatggaggacggcgtcttcccgcacatgcgcgccctc
ggccagaccaaggagctggaggaggagcggcggctcgcctatgtgggcatcacccgcgcc
cgcgagcggctctatctgacccgggcgagcatgcgcagcgcctggggccagccctcgtac
aaccctccgtcgcggttcctggaggagatccccgagaagtacgtgcagtggcggcgcacc
ggccccgccacgccgtcggcgacgatgggcaccgtctcctcgtcgttctcctcgtcccgc
tcgggcggcacctccacgggcttcggcggcggcaaggcgggcccgagcggcttcgccacc
cggcgcacgaaggaccgtccggtggtggccctggccgtcggcgaccgcgtcacgcacgac
tcgttcggtctcggcacggtcgtcggggtcaagggcagcggtgacaacgccgaggcgacg
gtcgacttcggcgaggagaagccgaagcggctgctgctgcggtacgcgccggtggagaag
ctctaa
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