Streptomyces albireticuli: SMD11_5166
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Entry
SMD11_5166 CDS
T05230
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
salj
Streptomyces albireticuli
Pathway
salj03030
DNA replication
salj03430
Mismatch repair
salj03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
salj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SMD11_5166
03430 Mismatch repair
SMD11_5166
03440 Homologous recombination
SMD11_5166
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
salj03032
]
SMD11_5166
03400 DNA repair and recombination proteins [BR:
salj03400
]
SMD11_5166
Enzymes [BR:
salj01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
SMD11_5166
DNA replication proteins [BR:
salj03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
SMD11_5166
DNA repair and recombination proteins [BR:
salj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
SMD11_5166
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
BRCT
DNA_pol_A_exo1
PTCB-BRCT
DEDDh_C
Motif
Other DBs
NCBI-ProteinID:
ARZ70758
UniProt:
A0A1Z2L963
LinkDB
All DBs
Position
complement(5887778..5888986)
Genome browser
AA seq
402 aa
AA seq
DB search
MPCSPRASAAPGKATGAGRRLSAGPADAREDVARVTAGTVRAGLTPCYGTGRGPRCQCGP
VFSVTMLVDRAAADSPTPWPAAYPEGYAVVDVETTGLARDDRIVSAAVYQLDARGRVEDH
WYTLVNPQRDPGPVWIHGLTTEVLAGAPLFPEIADELAKRLDGRVLVAHNAAFDWSMLAR
EYARARATAPVRQRLCTIALSKELRLPLPNHKLESLAAHYGVVQQRAHHALDDARVLAEA
FRPSLHLAAEAGLRLPLLACQPLTEWSDGPAAPRSASVGYQPSYRSGTWRPSRKRPACPY
PNPGRYKSGEQLIQGMRVAFSGDTSVDRELLEDRAVEAGLHVATSVSRLTSLLVTNDPGS
PTSKTTKARSFGTPVIDEAAFMQLLSHVVPAPGGKAGPATNG
NT seq
1209 nt
NT seq
+upstream
nt +downstream
nt
gtgccctgctcaccccgcgcgagcgccgcgcccgggaaggcgaccggcgcggggcgccgc
ctctccgccgggcccgccgacgcgcgcgaggacgtggcgcgggtcacggccggcaccgtc
cgggccggcctgaccccctgttacgggaccggccggggcccgcgctgtcagtgcgggccc
gtattctctgtgaccatgctcgtagaccgcgccgccgccgattcgccgaccccgtggccg
gccgcctatcccgaggggtacgcggtcgtcgacgtggagaccaccgggctcgcccgggac
gaccggatagtgtcggccgcggtctatcagctggacgccaggggccgggtggaggaccac
tggtacaccctggtgaacccgcagcgggaccccggtccggtgtggatccacggcctcacc
accgaagtcctcgccggcgcgccgctcttcccggagatcgccgacgagctggcgaagcgg
ctcgacggccgggtcctggtcgcgcacaacgccgccttcgactggtcgatgctcgcccgg
gagtacgcccgcgcgcgggcgacggctcccgtgcgccagcggctgtgcaccatcgcgctc
tccaaggagctgcgcctgccgctgcccaaccacaagctggagtccctggccgcgcactac
ggcgtcgtgcagcagcgcgcccaccacgccctggacgacgcccgggtgctcgccgaggcg
ttccggcccagcctgcacctggcggccgaggcggggctgcggctgccgctgctggcctgc
cagccgctgacggagtggtccgacgggccggcggccccgcgctccgcctcggtcggctat
cagccgtcctaccggtcggggacgtggcggccgagccgtaagcggccggcctgcccctac
cccaaccccggccggtacaaatcgggtgaacagctcatccagggcatgcgggtggcgttc
tccggtgacacctccgtcgaccgggagctcctggaggaccgggccgtcgaggccgggctg
cacgtcgccacaagtgtgtcccggctcaccagcctcctggtgaccaacgaccccggctcc
cccacctccaagaccaccaaggcgcgctccttcggcacgccggtgatcgacgaggcggcc
ttcatgcagctgctctcgcacgtggtcccggccccgggcggcaaggcgggcccggccacg
aacggctga
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