Salinimonas iocasae: FBQ74_00830
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Entry
FBQ74_00830 CDS
T06006
Symbol
uvrD
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
salk
Salinimonas iocasae
Pathway
salk03420
Nucleotide excision repair
salk03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
salk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
FBQ74_00830 (uvrD)
03430 Mismatch repair
FBQ74_00830 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
salk03400
]
FBQ74_00830 (uvrD)
Enzymes [BR:
salk01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
FBQ74_00830 (uvrD)
DNA repair and recombination proteins [BR:
salk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
FBQ74_00830 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
FBQ74_00830 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
PcrA_UvrD_tudor
AAA_12
AAA_11
Viral_helicase1
Motif
Other DBs
NCBI-ProteinID:
QCZ92105
UniProt:
A0A5B7Y9N7
LinkDB
All DBs
Position
complement(202935..205106)
Genome browser
AA seq
723 aa
AA seq
DB search
MDVSLLLDSLNDKQREAVGAPLSNMLVLAGAGSGKTRVLVHRIAWLMEVENITPFSILAV
TFTNKAAREMRGRIESLMGRNLHNMWIGTFHGLAHRLLRSHHSEAGLPENFQILDSDDQY
RLVKRILRAMNLDEKHWAPKQVQWYINGNKDEGLRPQHIETHGDAVAQKMREIYAAYQEA
CDRSGLVDFAELLLRAHELWAKNPEVLAHYQRRFKAVLVDEFQDTNNIQYAWLRMLCSAD
TNNIMIVGDDDQSIYGWRGANVDNIHKFLKDFDQTTTIRLEQNYRSTGNILNAANAVIDN
NAGRLGKELWTEDSEGDLISVYAGFNELDEARFIVSQIKSWLDEGNPLKECAILYRNNAQ
SRVLEEALLHEAIAYRIYGGLRFFERQEIKDALGYLRMINHPHDDAAFERVVNTPSRGIG
EKTVTQVRMTAREHNCSLWQASNLLLSEGSLNGRAANALRSFTSLITELEQTVLSLSLEE
QADKTIKDSGLYAMYQAERGEKAQARLENLEELVTACKQFIVPEEADEMTPLSAFLAHAS
LEAGETQADTEQDAVQMMTIHSAKGLEFPLVFMAGVEEGMFPSQMTNDEPGRMEEERRLC
YVGMTRAMKKLFITYAESRRVYGQDKFHTASRFIREIPSEYVQEVRLKSQVSRPVHNRFS
RAASHEAFQDSGFTLGQRVTHPKFGDGVVLNFEGAGDHGRVQVNFDEFGAKWLVLAYAKL
KAN
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
atggatgtctctttactgctcgacagtcttaacgataaacaacgtgaagctgtgggcgcg
ccactttccaatatgctggtactggctggcgcaggcagtgggaaaacccgcgttttagtg
catcgcattgcctggttgatggaagtagagaacatcacgccattttccattcttgctgta
acgttcaccaacaaagccgcccgtgaaatgcggggtcgaatagagtcattgatgggccgc
aacctgcacaatatgtggattggcacgttccatggcctcgcccaccgattgttacgaagc
catcactcagaagccgggctgcctgaaaattttcagattcttgactcagatgaccagtat
cgcctggtgaagcgtattttgcgcgccatgaaccttgacgaaaagcactgggcccccaag
caagttcaatggtatatcaacggtaataaagatgagggtttacgcccgcagcacatagaa
acccatggtgacgctgtagcgcagaaaatgcgcgagatttacgccgcttatcaggaagcg
tgtgaccgctctggcctggttgactttgccgagctgttactgcgggcacatgaactttgg
gccaaaaaccccgaggtactggcacactatcagcgccgtttcaaagccgtgctggtcgac
gagtttcaggataccaacaacatccagtatgcatggctgcgtatgctgtgcagtgctgat
actaacaacatcatgattgtgggtgatgatgaccagtcaatctatggctggcgtggtgcc
aatgttgataatatccataagtttttaaaagattttgaccagaccaccactatccgtctt
gagcaaaactatcgctctaccggcaatattcttaatgctgccaatgcggtaattgataat
aatgcaggcaggctgggcaaagagctgtggaccgaagacagcgaaggcgatttgatatca
gtctacgccggctttaatgagcttgatgaagcacggttcatcgtttcgcagataaaatcc
tggctggatgaaggtaatccgcttaaagaatgcgccattttatatcgcaacaatgcgcag
tcccgggtgctggaagaggcactcttgcacgaggccatagcttatcgcatttatggcggc
ctgcgcttctttgaaagacaggagataaaggatgcgctgggttatctgagaatgattaat
caccctcatgatgacgcagcatttgagcgggtggtaaatacacccagccggggcatcgga
gaaaaaacggtaacccaggtcagaatgaccgcccgtgaacacaactgctctttgtggcag
gccagtaacctgctgctatcagaaggttctctgaacgggcgtgctgccaatgcgcttcgt
agttttacatcgcttataacagaactggagcagaccgttttatccctgtcactggaagaa
caggccgacaaaacgattaaagattcaggcctgtacgccatgtatcaggccgaacgtggt
gaaaaagcgcaggcgcggctggaaaacttagaagaactggttactgcgtgtaaacagttt
atcgtgcctgaagaggcggatgaaatgaccccgctatctgcttttcttgcgcatgcttcc
cttgaagcaggtgaaacccaggctgatactgagcaggacgctgtgcagatgatgacaatt
cacagcgccaaagggctggagttcccgctggtctttatggcgggtgtggaagaaggcatg
ttcccgtcacagatgaccaatgatgagcccggcagaatggaagaagagcgccgtctttgt
tatgtgggaatgacccgtgcaatgaagaagctgttcattacttacgccgaaagccggcgc
gtttacgggcaggataaatttcatacggcatcgcgctttattcgtgaaatcccttctgag
tatgtgcaggaagtccgccttaagagtcaggtatccaggcccgtacataaccggtttagc
cgcgcggcatctcacgaagcgtttcaggacagcggttttacgctgggtcagcgcgtcact
caccctaaattcggcgatggcgtggtacttaactttgagggcgctggtgaccatggtcgc
gtacaggtgaactttgatgagttcggcgcaaaatggctggtattggcttatgctaaacta
aaggctaattga
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