Salinimonas iocasae: FBQ74_02080
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Entry
FBQ74_02080 CDS
T06006
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
salk
Salinimonas iocasae
Brite
KEGG Orthology (KO) [BR:
salk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
salk03021
]
FBQ74_02080 (rpoH)
Transcription machinery [BR:
salk03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
FBQ74_02080 (rpoH)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
GntR
HTH_25
HTH_3
HTH_11
Sigma70_r3
Motif
Other DBs
NCBI-ProteinID:
QCZ92337
UniProt:
A0A5B7Y976
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All DBs
Position
485946..486800
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AA seq
284 aa
AA seq
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MSKTMQSMALSVPQNGSIEGYIQAVSSINMLTADEERSLALKLREEGDLESARKLVMSHL
RFVVHIAKSYSGYGLPQADLIQEGNIGLMKAVKRFDPSVGVRLVSFAVHWIKAEIHEFVL
KNWRIVKVATTKAQRKLFFNLRKAKKRLGWFTNAEVQTVASELGVSTKEVLQMEARMSSQ
DQAFDLSADDDENGSFAPVQFLEDKSTDVETDVINQDWDMNASKRLYSAIKTLDGRSQDI
IETRWLADNKITLQDLADKYQVSAERVRQIEKNAMKKLQAAMVA
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atgagcaagacaatgcaatcgatggccctttcggttcctcaaaacggtagcatcgaaggc
tacattcaggcggtcagttcaatcaatatgctgacagcggatgaggaacgttctctggcg
ttgaaacttcgtgaagagggtgaccttgaatctgcccgcaagctggttatgtcgcacctg
cgtttcgttgtgcatattgctaaatcttattccggctacgggttgcctcaggctgatttg
attcaggaaggtaatatcggcctgatgaaagctgttaaacgctttgacccatcagtaggc
gtgcgcctggtctcatttgccgttcactggatcaaggctgagatacacgaattcgtattg
aagaactggcgtatcgttaaagtcgctacgacgaaggcgcaacgtaaattgttctttaat
ttgcgtaaagctaaaaaacgtctgggttggttcaccaacgctgaagtacaaactgttgcc
agcgagctgggtgtgagtaccaaagaagtgcttcagatggaagcgcgtatgagtagtcag
gatcaggcattcgatttgagtgcggatgatgacgaaaatggcagtttcgcaccggttcag
tttttagaagacaaaagtaccgacgttgaaaccgacgttatcaaccaggattgggatatg
aacgcaagcaagcgtttatatagcgcaatcaaaacgttggatggccgaagccaggatatt
attgaaacccgctggctggctgataacaagattacgttgcaggatttagctgacaaatat
caggtctctgcggagcgagttcgtcagattgaaaaaaatgcgatgaaaaaactacaggcg
gcgatggtagcctga
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