Salinimonas iocasae: FBQ74_06670
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Entry
FBQ74_06670 CDS
T06006
Symbol
sbcD
Name
(GenBank) exonuclease subunit SbcD
KO
K03547
DNA repair protein SbcD/Mre11
Organism
salk
Salinimonas iocasae
Brite
KEGG Orthology (KO) [BR:
salk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
salk03400
]
FBQ74_06670 (sbcD)
DNA repair and recombination proteins [BR:
salk03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
FBQ74_06670 (sbcD)
Archaeal homologous recombinant proteins
FBQ74_06670 (sbcD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SbcD_C
Metallophos
Metallophos_2
PRORP
OxoGdeHyase_C
Motif
Other DBs
NCBI-ProteinID:
QCZ93186
UniProt:
A0A5B7YD29
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Position
1525704..1526939
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AA seq
411 aa
AA seq
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MRILHTSDWHLGQTFFTKTRKSEHDAFLKWLLALSEKECVDAIIVAGDIFDTGTPPSYAR
QLYNQFVVDLQKQRCQLVVLGGNHDSVSVLNESRQLLSCLNTHVIASTGIPTEEQVISLY
SKDKEVGAILCAIPFIRPRDVLLSQAGDSGMDKRRALGEAITEHYKAVYEAALTQREAVG
KSVPIIATGHLTALGVSQSDSVRDIYIGTLEGFAADGFPPADYIALGHIHRPQTVAKSDH
IRYSGSPIPLSFDELKHAKHVNIVDFSGDKHTVQVNPVEVPVFQAMASHSGTLKSLEQQL
SVYENSEQTVWLSLEVQSQGYLSDLQQRIAAITEPLNAEVLQLRRARQNTAHNGVPEQKE
TLSELTPAQVFERRLALENFEEDEAAQSRKTRISQQFNAIYQELRSEDSAQ
NT seq
1236 nt
NT seq
+upstream
nt +downstream
nt
ttgagaattttgcatacgtctgactggcatctggggcagacctttttcactaaaacccga
aagtctgaacacgacgcgtttttaaagtggttattagcattaagcgaaaaagagtgtgtt
gatgccattattgtggcgggggacatcttcgataccggcacgccgccaagctatgcccgg
caactttacaaccagttcgtggtagatctgcagaagcagcgttgtcagctggtggtgctg
gggggtaaccatgattcagtatcggtgcttaatgaatcgcgccagttgctgtcttgcctg
aatacgcacgtaattgccagtacggggattcctaccgaagaacaggtaataagtctttac
agcaaagataaagaggttggtgccattctttgtgccattccctttattcgccccagagat
gtccttctcagtcaggccggtgactctggcatggataaacgtcgggctcttggcgaagca
atcactgagcattataaggccgtatatgaggcagcgctgacacagcgcgaagcggttggt
aagtcagtccccatcatcgccaccggccatttaacagcactgggcgtcagtcagtctgac
agtgtcagggatatctacatcggaacacttgaagggttcgcggcagacggctttccgccg
gctgattatattgcgcttggtcacattcaccggcctcagacggtggctaaatctgatcat
attcgctacagcgggtcgcccatccccctgagctttgatgagctgaaacatgccaagcac
gtgaacattgtcgactttagcggtgataagcacacagtacaggtaaacccggtcgaggtg
ccggtttttcaggcaatggccagtcacagcggtacgcttaagtcactggagcagcagttg
tcggtctatgaaaatagcgagcagacagtatggctgagtcttgaagtgcagtcgcagggg
tatctgagcgatcttcagcagcgtattgctgctataacagaacctttaaatgcggaagtg
ctgcaacttcgtcgtgcccggcaaaacacggcgcacaatggcgtgcctgagcaaaaggaa
accttgagcgagctgacgcctgcgcaggtgtttgagcgacgtctggcactggaaaacttt
gaggaagacgaagcggctcagtcgcggaaaacgcgcatctcacaacagtttaatgcgatt
tatcaggaactgagaagcgaggacagtgcacaatga
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