Salinimonas iocasae: FBQ74_06925
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Entry
FBQ74_06925 CDS
T06006
Symbol
recB
Name
(GenBank) exodeoxyribonuclease V subunit beta
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
salk
Salinimonas iocasae
Pathway
salk03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
salk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
FBQ74_06925 (recB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
salk03400
]
FBQ74_06925 (recB)
Enzymes [BR:
salk01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
FBQ74_06925 (recB)
DNA repair and recombination proteins [BR:
salk03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
FBQ74_06925 (recB)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
AAA_11
AAA_30
AAA_25
ResIII
AAA_22
Motif
Other DBs
NCBI-ProteinID:
QCZ93235
UniProt:
A0A5B7YCH7
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All DBs
Position
1585416..1589027
Genome browser
AA seq
1203 aa
AA seq
DB search
MSKGEVQTSAALDVVALPLHGRHLIEASAGTGKTFNITRLYLRLLLEKKLGVQQILVMTF
TNAATEEIRGRIAQTLDAALTYWQERRLNGPVEEDPVFAQLYDRFAGEEAEQLLQAALLE
LDEASVYTIHGFCNRILSELAFSGGAAMQLSLQTDTRELYLQAARDWIRHMSGKEEEYSL
LVLAGWHIPEQFLATFESAIRSGLSPRVVTAQEITEQAEAALADRQKALQPQFKQVRDTI
TSQYDVIADALIINDKNRALRESQFEEITAWLHAASVSPAPDALGKFVHGNRLRGKDDLK
ALLAPLKSLATEVKSAIDSIEKQRDAQLDAAPAMQVAAQAFAFIRAHVTRQKAQQGIVDF
DDLITMLAEKTDHADTELARALRRKFPAALIDEFQDTDANQYQILSSVYPPDSINEILLM
IGDPKQAIYGFRGGDIFTYLKAGRSADFRWVMDTNYRSVPAMVQSYNRLFYGAPLDGAPA
DVFGFDISYDPVNAAPTASANKTPLHDPETDRQALNYIALASDSTEDTPAKFVMQQQLAR
WIANEIVRLLQQARLGETPLKPQDIAILVRSAGEAKIIQQALQTAGLASVFLSNRENLFA
AGEARDLYRVLDGIWHYSDHGRLCAALSSPMFGLSHQTLIDLLYHENDQLWESVMETISL
LRRIWQQRGCMALILHLMEESFAAGGDEIERQLTNYLHLAEVLEREAATRAQPEQLLIWL
HRQISEPALAQEHVQRLESDAHLIQLITQHGAKGLEYPIVFVPFASDYRNPVKVGNQEVA
LFRYFDDTTNTLCLQLGATPDIKERVTQEADAEAMRLLYVAVTRAAHRCYLGVAPFDNHL
QSSLAKAADVGAYDSWEQAITRISQESGTSTALVHATDESHAQLSDISSEATPDLNVDTF
TGDVKEAWRLYSFSALARKERVVNQTRREAELQEILPQTMGEPESLPMRFSFQKGAAAGN
LLHDILEITDFSRPDWFSESQMTTLAPMTQLFGLDDAETEALFDWLQQVLDTPLNRNGLT
LSGLSKASTLREAEFYFPMANLSQQQLNQFLADYRQGQDHGARFFPAFDTHQLEGMMHGF
IDLIFEYEGKYFVADYKSTYLGDTFGDYLPEKLRHNNQHHLYDLQYLIYSVALHRYLQNS
LPDYSAQKHFGGVYYLYVRGMHPENENKEGVYFTPLSVSRLHALDRLFASQDSQNKAGES
VCS
NT seq
3612 nt
NT seq
+upstream
nt +downstream
nt
atgagtaagggcgaggtgcaaaccagtgctgcgctggatgtcgtagctttacccttacat
gggcggcatcttatcgaagccagtgcgggaaccggcaaaacatttaatatcacacgcctt
tatttgcgcttgctactcgaaaaaaagctgggtgtacaacaaattctggtgatgacattt
accaatgccgccaccgaagagattcgcggcagaatagcgcagacactggacgctgcgttg
acgtactggcaagaacgtcgtcttaacgggccggtagaggaagatccggtttttgcccag
ctgtacgaccggtttgccggtgaagaggctgaacaattgcttcaggccgctttgcttgag
ctggatgaagcgtcggtgtacaccattcacgggttttgtaaccggatcttaagtgaattg
gcgttctcaggcggtgcagcaatgcagctttcgctgcaaactgacacgcgggagctttat
ctgcaggcggcccgggactggatccgccatatgtccggcaaggaggaggaatacagccta
ctggtgctagctggttggcatattccagagcaatttctggcgacctttgaaagtgctatt
cgcagtggtcttagtcctcgtgttgttaccgcgcaggagattaccgagcaggctgaggct
gcgctggcagaccggcaaaaggctctgcaaccgcaatttaagcaggtcagggataccatt
accagtcagtatgatgtgattgccgatgcactgattattaatgataaaaaccgtgcgtta
agagaatcccaatttgaggagatcaccgcctggctgcacgctgcatctgtcagtccggca
ccagatgcactgggtaagtttgttcacggcaatcgtttgcgaggcaaagacgatctcaaa
gcgttactggcgccgctgaagtccctggctactgaggtaaaatctgccatcgatagcatc
gaaaagcagcgtgatgcacagcttgacgctgcgccggcgatgcaggtggcagcacaggca
ttcgccttcattcgtgcacatgttacccgacagaaggcacagcaggggattgtcgatttt
gacgatcttattaccatgctggcagaaaaaaccgaccatgcagatacggaactggcacga
gcattacgccgcaaattccccgccgcgttaattgatgagtttcaggataccgatgctaac
cagtatcagattttatccagtgtttacccacccgatagtatcaatgaaattttgttgatg
attggcgatcctaaacaagctatttacgggtttcgcggcggcgatatatttacctatctc
aaagccggcagaagtgcagactttcgttgggtgatggacaccaattatcgttcggtgcca
gcgatggtgcaaagttataaccgcttattctacggtgcacctttagatggggcgccggca
gatgttttcggctttgacataagctatgacccggttaacgccgcccctacggccagtgct
aacaaaacacccttacatgatccggagactgaccggcaggcgcttaactatatcgcttta
gcgtcagatagcaccgaggacacgccagcgaaatttgtgatgcaacagcagcttgcccgg
tggattgcaaatgagattgtgcgcctgctgcagcaggccagactgggcgagacgccactt
aagccacaggatatagccattcttgtgcgcagtgccggtgaggcaaagattattcagcag
gcattgcaaacagccggactggcgtctgtttttctcagcaacagagaaaacctttttgca
gccggagaggccagggatctctatcgcgttctggacggtatctggcattacagtgatcat
ggtcgattatgtgcagccctgagtagtcctatgttcggattgtctcatcagacccttatt
gacctgctctatcacgaaaatgaccagctttgggagtcggtcatggagaccatcagcctg
ctgcgccggatttggcagcaacgaggttgtatggccctgatactccatcttatggaagag
tcttttgcagcgggtggcgatgagattgagcgccagctcaccaactatctgcatttggca
gaagtacttgaacgtgaagctgctacacgtgctcagcctgagcaattactaatctggctg
catcgtcaaatcagtgagccagcgctggcacaggagcatgtgcaacgccttgaaagtgat
gcgcatttgattcagctgataacgcaacacggcgctaaagggttggaatatcctattgtg
tttgtgccattcgccagcgactatcgcaatccggtcaaagtcggtaatcaggaagtcgcg
ctttttcgctactttgatgacacaactaacacgttatgcctgcaactgggtgcaactccc
gatattaaggagcgtgtcacccaggaagctgatgcagaagctatgcgcctgctttatgtg
gctgttacccgtgcggcccaccgttgctatctgggggttgcgccgtttgataatcacctg
caatcgtctcttgccaaagccgctgatgttggtgcgtatgatagctgggagcaggcgatt
acccgtatcagtcaggaatctggcacatcgacagcgttagtccatgctaccgacgagtcc
catgctcagctatcagacatctcatcagaagccactccagatctcaacgtagatacgttt
accggtgacgtaaaagaggcatggcgactgtactcgttttctgcactggccagaaaagag
agggtggtaaaccagacccgacgggaggccgagctacaggagatacttccgcagacaatg
ggagagccagagtcattaccaatgcgcttttcatttcaaaaaggcgctgcagccggtaac
ttactgcatgatattcttgagatcacagacttcagtcgtccagactggttcagtgagtcg
cagatgacaacactggcgcctatgacacagttgtttggtctggatgatgctgaaactgag
gcgctgtttgactggctgcaacaagttctggacacgccgttaaacagaaatggccttaca
ctctcggggctgagtaaagcgtccaccctgcgcgaggcggagttttattttcccatggca
aatctcagccagcagcagcttaaccagtttctggccgattaccggcagggacaggatcat
ggcgcccgatttttccctgcattcgatacgcatcagttagaaggcatgatgcatggtttt
attgatttgatttttgagtatgagggtaaatactttgtcgctgattataagtccacctat
ctgggcgatacattcggtgactatttgccagaaaagctacgccacaataatcagcaccat
ctctacgatctgcagtatcttatttacagcgtggcactacatcgttatctgcaaaatagc
ttacctgattattcagcacaaaagcattttggcggtgtttattatctttatgtacgcggt
atgcacccggaaaacgagaacaaagaaggcgtgtactttacgcctctttctgtttcacga
ttacatgccctggaccgccttttcgccagtcaggacagtcagaataaagcgggagaaagc
gtatgcagttaa
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