Salinimonas iocasae: FBQ74_09725
Help
Entry
FBQ74_09725 CDS
T06006
Symbol
holB
Name
(GenBank) DNA polymerase III subunit delta'
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
salk
Salinimonas iocasae
Pathway
salk03030
DNA replication
salk03430
Mismatch repair
salk03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
salk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
FBQ74_09725 (holB)
03430 Mismatch repair
FBQ74_09725 (holB)
03440 Homologous recombination
FBQ74_09725 (holB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
salk03032
]
FBQ74_09725 (holB)
03400 DNA repair and recombination proteins [BR:
salk03400
]
FBQ74_09725 (holB)
Enzymes [BR:
salk01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
FBQ74_09725 (holB)
DNA replication proteins [BR:
salk03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
FBQ74_09725 (holB)
DNA repair and recombination proteins [BR:
salk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
FBQ74_09725 (holB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
AAA
AAA_16
AAA_22
nSTAND3
TsaE
RNA_helicase
NPHP3_N
Mg_chelatase
NACHT
SAM_3
AAA_5
AAA_24
RuvB_N
TniB
Motif
Other DBs
NCBI-ProteinID:
QCZ93752
UniProt:
A0A5B7YDJ3
LinkDB
All DBs
Position
complement(2210252..2211151)
Genome browser
AA seq
299 aa
AA seq
DB search
MLMPPWFNDVFQQLVKRHSDQRLHHGLLLSGQSGIGKTLLAHTMAKTLLCKSVSNNGFCN
ACQSCQLFDAQTHPDFSELSSDKQLGVDKIREGIARLNATSQLSGNKVLIIPRADMMTES
AANALLKTLEEPTDNTYLILVTDRMNRLLPTIISRCEKHILTRPHHEVAQAWLADQGFTD
VTVALLEAYAGAPLRVKAALEENSDSISYPQYQEGLEMLLSGTNDAVTLATDWQASATTI
VDWLQQYAHRSFVQHNSPAFYKLYKTCIDAHQALQNPGVNKIMILSSVLAEVKRPDSSI
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
atgttgatgccgccctggttcaatgatgtttttcagcaactggtaaagcggcacagcgac
cagcgcctgcaccatggcttgctgttatcaggtcagtccggtatcggcaagaccttattg
gcacatacaatggctaaaacgttgctatgtaaatctgtcagcaataacgggttttgcaat
gcatgtcagtcttgtcaattgtttgatgcacaaacgcatccggacttcagtgagctttcc
agcgataagcagttaggcgtggataaaatccgggagggaatcgcacgtctcaatgctacc
tctcagttaagtggtaataaagtgcttattattccgcgtgcagatatgatgacagaatct
gctgcgaatgcgctgttaaaaacactggaagagccaacggataacacttacctcatcctg
gtaaccgaccgaatgaatcgattactgcctacaattataagccgctgcgaaaaacacata
ctgaccaggccacaccatgaggtagcgcaggcttggttggcagatcagggctttaccgat
gtcactgtcgcgcttttagaggcatatgccggtgcaccactcagggtaaaggcagcttta
gaggaaaattccgacagtattagttatccccagtatcaggaaggtcttgaaatgttactt
agcggtacaaatgatgcggtaacacttgctactgactggcaggcatcagcaaccaccatc
gttgactggttacagcagtatgcgcatcgatcatttgttcaacataacagtccggcattc
tataaactgtataaaacctgcattgacgctcatcaggctttacaaaatccgggcgtgaat
aaaattatgatcctcagtagcgtgctggccgaagtaaaacggccagatagttcgatttag
DBGET
integrated database retrieval system
