Salinimonas iocasae: FBQ74_09965
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Entry
FBQ74_09965 CDS
T06006
Symbol
sbcB
Name
(GenBank) exodeoxyribonuclease I
KO
K01141
exodeoxyribonuclease I [EC:
3.1.11.1
]
Organism
salk
Salinimonas iocasae
Pathway
salk03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
salk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
FBQ74_09965 (sbcB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
salk03400
]
FBQ74_09965 (sbcB)
Enzymes [BR:
salk01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.1 exodeoxyribonuclease I
FBQ74_09965 (sbcB)
DNA repair and recombination proteins [BR:
salk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
FBQ74_09965 (sbcB)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
FBQ74_09965 (sbcB)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
FBQ74_09965 (sbcB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_X-T_C
RNase_T
Rubis-subs-bind
GAGA
Motif
Other DBs
NCBI-ProteinID:
QCZ93792
UniProt:
A0A5B7YDM7
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All DBs
Position
2260064..2261494
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AA seq
476 aa
AA seq
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MTTDATFLWHDYETFGTSAKKDLPCQFAAIRTDMDLNIVGKPINIMSQIANDYLPQPGAC
LVTGITPQQTLRDGMPEAQFALRIAQYMSQPNTCVAGYNSIRFDDEVSRHLFYRNFIDPY
AREWRNGNSRWDIIDLARACFALRPEGINWPERDDGTPVFKLEALTAANGLEHGHAHDAL
SDVYATIALAKLIKDKQPRLFEYALTLRNKHNVMAQLDLSKPSVVLHISSRFSAGQGCAS
WVMPIAMHPTNANAVIAVDLAKNADAIIGATAQEIEQRLYARRDEIDPELRPALKLVHIN
RSPFITTAKAMTQENAERLGLDREYCLENFKRLSAVSDLAQKLTQVYSTPPDTDQEDADH
ALYSGGFLNDEERRWCNEVISRDPEQLSAMSELTQNNKLKTMLFRYRARNYPHTLTESEL
QRWQHHRTARLTEPGSGAPITLEPYLMELEQLAGEHKDDANKQAILRALFQYAENL
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
atgactacagacgccactttcctatggcatgattatgaaacttttggcaccagtgcaaaa
aaagatttgccctgtcagtttgccgcaatcagaaccgatatggatctgaatatcgttggt
aagcctatcaatataatgagtcagattgccaacgattatctgccccagcccggcgcatgt
ctggttaccggtataacacctcagcaaacactacgcgatggcatgcctgaagcacagttt
gcattacgtattgcccaatacatgagccagcctaatacctgtgttgccggttataacagc
atccgctttgacgatgaggtatccaggcaccttttctatcgtaactttatcgatccctac
gccagagagtggcgaaacggtaatagccgctgggacattattgatttggctcgcgcttgt
tttgcgcttcgccccgaagggatcaactggcccgaacgcgatgatggtacacctgtcttt
aaactggaagcattaaccgctgcgaacggtttggaacacggccacgcgcatgatgcttta
agcgatgtatacgcgacgattgcgcttgcaaagctgattaaagacaagcagcccaggctg
tttgaatatgccctgacgttgcgtaacaagcataatgtgatggcccagctcgatttgtct
aagccctctgttgtcttacatatttcttcacgattctcggccggccaaggctgtgcatcg
tgggtcatgccgattgcaatgcatccgactaacgctaacgccgtaatcgctgtcgatctt
gcgaaaaatgctgacgccataattggtgccacagcgcaggaaattgagcaacgcctttac
gccagacgcgatgagattgaccccgagctcagaccagccctgaaactggttcatattaat
cgctcaccgtttataacaacagcaaaagccatgacgcaggaaaacgccgaaagactgggg
ctggatcgtgagtattgtcttgagaatttcaaaagactgtctgctgtcagtgatttagcg
caaaaacttactcaggtatatagcacgccacctgacacagaccaggaagatgcggatcat
gccctgtacagcggaggcttcctcaatgatgaagagcgccgctggtgtaatgaggtaatc
agccgtgatccggaacagctttcagcgatgtcggaactaactcagaacaataagctcaaa
acgatgctttttcgataccgggcgcgaaactaccctcatactctcactgaaagcgagttg
cagcgttggcagcaccatcgcaccgcacgactaaccgagcccggcagtggcgcgccgatt
actctggaaccttacctgatggagcttgagcagctggccggtgagcataaagatgatgcc
aataaacaggcaattctacgtgctttgtttcagtatgctgaaaacctttga
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