Salinimonas iocasae: FBQ74_12875
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Entry
FBQ74_12875 CDS
T06006
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
salk
Salinimonas iocasae
Pathway
salk03030
DNA replication
salk03430
Mismatch repair
salk03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
salk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
FBQ74_12875 (dnaE)
03430 Mismatch repair
FBQ74_12875 (dnaE)
03440 Homologous recombination
FBQ74_12875 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
salk03032
]
FBQ74_12875 (dnaE)
03400 DNA repair and recombination proteins [BR:
salk03400
]
FBQ74_12875 (dnaE)
Enzymes [BR:
salk01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
FBQ74_12875 (dnaE)
DNA replication proteins [BR:
salk03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
FBQ74_12875 (dnaE)
DNA repair and recombination proteins [BR:
salk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
FBQ74_12875 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
DNA_pol_IIIA_C
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
QCZ94308
UniProt:
A0A5B7YFI7
LinkDB
All DBs
Position
complement(2896879..2900343)
Genome browser
AA seq
1154 aa
AA seq
DB search
MTSPFIHLRVHSDFSMMDGLNKVKPILEKVSQMNMPAVALTDQMNMCGLVKFYSECHSRG
IKPIIGTDFWVTNEAFGETPFRLTLLAMNNEGYKNITILISKAYLRGHISHRAVIDQSWL
SEHAEGVIVLSGAQFGDVGVALTKNNKALLDDSLAFYQQYFNDRFYLELIRTGRPGEEDY
LHRAVELAQSRALPVVATNEVCFVSREGFDAHEIRVSIHDGYTLEDVRRPKNYSDQQYLR
SAEEMIDLFSDIPEAIENTVEIAKRCNVTVRLNEYFLPQFPTGGMTTEDFLVKVSQEGLE
ERLEFLFPDENERAEKRSAYDERLEIELGVINQMGFPGYFLIVMEFIQWSKDNDIPVGPG
RGSGAGSLVAYALKITDLDPLEFDLLFERFLNPERVSMPDFDVDFCMDRRDEVIEHVAEL
YGRQAVSQIITFGTMAAKAVVRDVGRVLGHPYGFVDRISKLIPSDPGMTLGKAFDVEPRL
PELYDEDEDVKDLIDMARILEGVTRNAGKHAGGVVIAPTTITDFAPLYCDDEGNNPVTQF
DKNDVETAGLVKFDFLGLRTLTIIQWAIDMIEEGKGKKIDITSIPLVDSRSFRMLQNAET
TAVFQLESRGMKELIKRLKPDCFEDIIALVALFRPGPLQSGMVDNFIDRKHGREEISYPD
ADYQHECLKEILEPTYGIILYQEQVMQIAQEMAGYSLGGADLLRRAMGKKKPEEMEKQRA
VFAEGSKDNNIDPDLAMKIFDLVEKFAGYGFNKSHSAAYALVSYQTLWLKAHFPAEFMAA
VMSADMDNTDKIVTLVDECQRMGLEILPPDLNAGRHKFTVDEHGRIVYGIGAIKGVGEGP
IEAIIEARENQGKFTDLFDFCAKVDIKRVNKRVLEKLVLAGALDNLGPHRAALMASLPEA
IAAAGQHAKAESFGQSDMFGLLTTEPEAVEQAFADVPQWPEKVWLEGEKDTLGLYLTGHP
INQYAKEIRHYTDGRLVDLRPTGKEQLASAVGLVLSVRVLTNKRGRRWAIVTLDDKSARM
DVRFFPDMYEQFESILESDRILLIKGQVSFDDFSGGNTITARDAMDIVQARERNARALAL
QIDSQQWQDEKLASLQEILQQFNGGSCPVELHVLHPDAEAVLTCGAQWYVTPEDQLLHDL
KQCLGEQAVTLSYH
NT seq
3465 nt
NT seq
+upstream
nt +downstream
nt
atgacatcgccctttattcatcttcgtgtacacagtgacttttcaatgatggatggcctg
aataaggtcaaacccattctggaaaaagtatcacaaatgaatatgcccgccgtggcgctg
accgaccaaatgaatatgtgtggattggtcaaattctattctgagtgtcacagtcgcggc
ataaagccaatcattggaactgacttctgggtaaccaatgaagcctttggcgaaacacct
ttcagacttacgctgctggcgatgaataacgaagggtataagaatattactattcttatt
tccaaggcttacttgcgagggcacatctcacaccgggcagtcattgatcaaagctggctt
tccgagcacgccgagggcgtaatcgtgctatccggcgcgcagtttggcgatgtgggtgtt
gctttaaccaaaaacaataaagcgctgttagacgattcattagcgttttatcagcagtat
tttaatgatcgcttctatcttgagcttatccgcaccgggcgacccggcgaggaagattat
ctacatagagcggtagaactggcacagagccgtgcactgcccgttgttgccactaacgag
gtatgctttgtcagccgagagggctttgatgcgcatgagatacgtgtgtccattcacgat
ggttacacgctggaggatgtgcgacgccctaaaaactacagcgatcagcagtacctgcgc
tcagcagaagagatgatcgacttattcagcgatattcctgaggccatcgaaaatacggtt
gaaattgccaagcggtgtaacgttactgtccgtttgaacgaatactttctgccccaattt
cccactggcggcatgacgactgaagattttctggtgaaagtatcgcaggaaggactggaa
gaacgccttgagtttttgtttcctgatgaaaatgaaagagcggaaaaacgatctgcttac
gatgagcgtcttgaaatcgagctgggcgttatcaaccagatgggcttcccgggttacttt
cttatcgttatggaatttatccagtggagtaaggacaacgatattccggttggtccggga
cggggctccggtgcgggctcgttagtcgcttacgcgttgaagatcacagatcttgatcca
ctggaatttgacctgcttttcgaacgattccttaaccctgaacgggtttccatgcctgac
tttgacgtcgacttttgtatggaccgtcgtgatgaggtcatcgagcacgttgccgaactg
tatggcagacaagcggtatcgcagataattacattcggcaccatggcggcgaaggccgtg
gttcgcgatgttggccgggtgctgggtcatccatacgggtttgttgacagaatctcgaag
ctgattccgtcagatccgggtatgacgctgggtaaagcttttgatgtcgaaccgcgtctg
cctgaactatacgatgaagatgaggacgtgaaagatctcatcgatatggcacgcatactg
gaaggggtaacaaggaacgctggtaaacatgctggtggggtcgttattgcccctactacc
attaccgactttgcgccgctgtattgtgatgatgaaggcaataacccggttacgcagttt
gataaaaacgatgtagaaaccgctggactggttaagttcgactttttggggctacgtacg
ctcacaatcattcaatgggctattgatatgattgaagagggtaagggcaaaaaaattgat
attacatcgataccccttgtagacagtcgtagcttcagaatgctgcaaaatgcagagacc
acggcggtattccagctcgaatcccgggggatgaaagagcttatcaagcgtcttaaaccg
gattgctttgaagatatcatcgcactggtagcgctattcagacccggcccgctacagtcc
gggatggtagataactttattgaccgcaaacatggaagggaagaaatatcgtatccggat
gcggactatcagcatgagtgtcttaaagagatccttgagcctacctacggcatcatcctg
tatcaggaacaggtcatgcagattgctcaggagatggcaggatactctctgggcggcgcc
gacctgcttcgtcgtgcaatgggtaagaaaaaacccgaagagatggagaaacagcgggct
gttttcgcggaaggctctaaagacaacaatatcgatcctgatctggcgatgaaaattttc
gatctggtagagaaattcgccggatacggatttaacaaatcgcattcagcagcttacgcg
ctggtgtcttatcagacgctatggctgaaagcgcattttcctgcagaatttatggcagcg
gttatgtctgcggacatggacaataccgataaaattgtgaccctggtcgatgaatgtcag
cgaatgggactggagattttaccgcctgatttgaatgccggacggcacaaattcaccgtg
gatgagcatggtcgtattgtttatggtatcggcgctatcaaaggcgtgggtgaaggccct
atcgaggccattatagaggcgcgtgaaaaccagggtaaatttactgatctgtttgatttc
tgtgctaaagtggacatcaagcgcgttaacaagcgcgtattggagaagctggtactggcg
ggagccttggataacctgggaccgcatcgggcagcgttgatggctagtttgccagaggct
atcgcggctgccggtcagcatgcaaaagctgagtcatttggtcagtcagatatgttcggc
ttgcttaccactgagcctgaagcggtggaacaggcgttcgctgatgtaccgcaatggccg
gaaaaagtgtggctggaaggtgaaaaagacaccctcgggctctacttaaccggacatccg
attaaccagtatgccaaagagataagacattacaccgatggtcgtttggtcgatttaaga
cctaccggtaaagagcaactggcctcagcggtcggtctggtgttaagtgtcagagtgctg
actaacaagcgtggacgacgctgggcaattgtgacactggacgataaaagtgccagaatg
gacgtccgctttttcccggatatgtatgaacagtttgaaagtatcctggaatcagacaga
attttgctgataaaaggacaggtcagctttgatgatttctccgggggcaatacaatcacc
gcccgggacgctatggacattgtgcaggcgcgggaacgaaacgcgcgcgcactggcactg
caaattgattcgcagcagtggcaggatgagaagctggcttcgttgcaagagatactgcag
caatttaatggcggcagttgtccggtcgagttgcacgtactgcatccggatgcagaagcc
gtgcttacctgtggcgcccagtggtatgtcactccggaagaccagctattgcacgattta
aagcaatgtctgggtgagcaggcagttaccctcagttatcattag
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