Salinimonas iocasae: FBQ74_15320
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Entry
FBQ74_15320 CDS
T06006
Symbol
rhlB
Name
(GenBank) ATP-dependent RNA helicase RhlB
KO
K03732
ATP-dependent RNA helicase RhlB [EC:
5.6.2.7
]
Organism
salk
Salinimonas iocasae
Pathway
salk03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
salk00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FBQ74_15320 (rhlB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
salk03019
]
FBQ74_15320 (rhlB)
Enzymes [BR:
salk01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
FBQ74_15320 (rhlB)
Messenger RNA biogenesis [BR:
salk03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
FBQ74_15320 (rhlB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Motif
Other DBs
NCBI-ProteinID:
QCZ94750
UniProt:
A0A5B7YHF5
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All DBs
Position
3423284..3424561
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AA seq
425 aa
AA seq
DB search
MQTTHLTETNFSDLPINDKVLSALQSANFTHCTPIQALALPPLLDGLDIAGQAQTGTGKT
IAFLVATFHYLMANAAKDNADSKGPKAIIMAPTRELAVQIYNDAKPLSEHTGLSLGLIYG
GEGYQSQRETLEEGVDIIIGTTGRILDYYKQNVFSLAHIQVAVLDEADRMFDLGFIKDIR
FLFKRMPPASERLSMLFSATLSYRVQELAYEHMNNPTHVQVEPETKTAKRVSEELFYPSD
DDKMRLLLTLMEEEWPERAIVFANTKHTCEKVNDWLEADGHRVGLLSGDVPQKKRMSILD
DFTKGKLDILVATDVAARGLHIDAVSHVFNYDLPDDAEDYVHRIGRTGRAGKSGIAISFA
CEKYALNLPAIEQYIHHAIPVTDYDRTALLEDVKPPRARQRKRTPNARNSNRRGRSRGKP
SNKNN
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atgcaaacaactcatttaaccgaaacaaatttttccgatttgcctatcaatgacaaggta
ctttcggcgcttcaatcagcaaatttcacccattgtacaccgattcaggctttagcttta
cctccattactggatggccttgatattgccgggcaagcccagaccggaaccggtaaaacc
attgcgtttctggtcgccacgttccactatctgatggctaatgctgccaaagataacgcg
gattcgaaagggccgaaagcaataattatggcaccaacccgtgagctggccgttcagata
tacaacgacgccaaaccactgagtgaacacactgggttatcacttggattgatatatggg
ggtgaaggttatcaaagtcaacgcgaaacgcttgaagaaggtgtcgatattattatcggg
acgaccgggcgtattctggactattacaaacaaaatgtgttcagccttgcgcatatccag
gtagccgttctggatgaagccgatcgtatgttcgatttgggcttcatcaaagatatccgc
tttttgtttaagcgtatgcctccggcgtcagaacgtctgagcatgctcttttctgctaca
ctgagttatcgggttcaggaactggcttacgagcatatgaataaccctactcatgttcag
gttgagccggaaacgaaaaccgccaagcgggtaagtgaggagctgttctatccgtctgac
gacgataaaatgcggttactgcttaccctgatggaagaagagtggcctgaacgtgccatt
gtttttgccaataccaagcatacctgcgaaaaggtgaatgactggcttgaagccgacggt
caccgggtaggcttgctcagcggtgatgttccgcagaaaaagcgcatgagcatcctggat
gatttcacaaaaggtaagcttgatatcctggtcgcgaccgatgtcgcagcacgtggattg
cacattgatgcagtaagccatgttttcaactatgatttacctgatgacgctgaagactat
gtccacaggatcggtcgtaccggtcgggccggcaaaagcggtatcgcaatcagctttgca
tgtgaaaaatacgcgctgaatctgcctgctatcgagcagtacattcatcatgcgattccg
gtcacagattacgaccgcacagctctgcttgaggatgtgaaaccgccccgggcacgtcag
cgtaaacggacacccaacgcacgtaattcaaatcgtcgcggtcggagtcggggaaaaccg
tcaaataagaataactaa
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