Salinimonas iocasae: FBQ74_16355
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Entry
FBQ74_16355 CDS
T06006
Symbol
groL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
salk
Salinimonas iocasae
Pathway
salk03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
salk00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FBQ74_16355 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
salk03019
]
FBQ74_16355 (groL)
03110 Chaperones and folding catalysts [BR:
salk03110
]
FBQ74_16355 (groL)
03029 Mitochondrial biogenesis [BR:
salk03029
]
FBQ74_16355 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
salk04147
]
FBQ74_16355 (groL)
Enzymes [BR:
salk01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
FBQ74_16355 (groL)
Messenger RNA biogenesis [BR:
salk03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
FBQ74_16355 (groL)
Chaperones and folding catalysts [BR:
salk03110
]
Heat shock proteins
HSP60 / Chaperonin
FBQ74_16355 (groL)
Mitochondrial biogenesis [BR:
salk03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
FBQ74_16355 (groL)
Exosome [BR:
salk04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
FBQ74_16355 (groL)
Exosomal proteins of other body fluids (saliva and urine)
FBQ74_16355 (groL)
Exosomal proteins of breast cancer cells
FBQ74_16355 (groL)
Exosomal proteins of colorectal cancer cells
FBQ74_16355 (groL)
Exosomal proteins of bladder cancer cells
FBQ74_16355 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
QCZ94947
UniProt:
A0A5B7YH28
LinkDB
All DBs
Position
complement(3645694..3647340)
Genome browser
AA seq
548 aa
AA seq
DB search
MAAKEVRFGDDARTKMLKGVNILANAVKVTLGPKGRNVVLDKSFGAPAITKDGVSVAKEI
ELEDKFENMGAQMVKEVASKANDEAGDGTTTATVLAQAIVTEGLKAVAAGMNPMDVKRGI
DKAVAAAVEELKALSTDCADGKSIAQVGTISANSDEEVGQIIAEAMEKVGKEGVITVEEG
QALQNELDVVEGMQFDRGYLSPYFINNQENGTVELDNPFILLVDKKISNIRELLPTLENV
AKAGKPLLIMAEDVEGEALATLVVNNMRGIVKVAAVKAPGFGDRRKAMLQDIAILTGGTV
ISEEIGLELEKAQLEDLGTAKRVVINKDNTTVVDGAGDDQAIEGRCAQIKGQIEESSSDY
DKEKLQERLAKLSGGVAVIKVGAATEVEMKEKKDRVEDALHATRAAVEEGVVPGGGVALV
RAAAKVLELQGENEDQTHGINLALRAMEAPLRQIATNAGAEASVVVNAVKGGEGNYGYNA
GNDTYGDMLEMGILDPTKVTRSALQFASSVASLMITTEAMVAEIPKEEGAGAPDMGGMGG
MGGMGGMM
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atggcagcgaaagaagtacgttttggtgatgacgcacgcacaaagatgcttaaaggcgtt
aacattcttgcaaacgcagtaaaagttacccttggtccaaaaggccgtaacgttgtttta
gacaagtcattcggcgcaccagcaattactaaagatggtgtatctgtagccaaagagatc
gagctggaagacaagttcgagaacatgggcgcgcagatggttaaagaagtggcgtctaaa
gcaaacgacgaagcgggtgacggtactacaaccgcaactgttctggcacaggcgattgtg
actgaaggtctgaaagccgttgcagcaggcatgaacccaatggacgttaagcgcggtatc
gacaaggcagttgctgctgcagttgaagagcttaaggcattgtctactgattgtgcagat
ggcaaatctatcgctcaggtaggtactatctctgcgaactctgatgaagaagttggccaa
atcattgctgaagcaatggaaaaagtaggcaaagaaggtgttatcaccgttgaagaaggt
caggcgctgcaaaacgagcttgacgtcgttgaaggtatgcagtttgaccgcggttacctg
tctccttatttcatcaacaaccaggaaaacggcacagttgaactggataacccgttcatc
ctgttagtagataaaaaaatctctaacatccgtgaactactgcctacactggaaaatgta
gcaaaagcaggtaagccactgctgatcatggcagaagatgttgaaggtgaagcactggca
acactggttgttaacaacatgcgcggtatcgttaaagttgcagctgttaaagcaccaggc
ttcggcgaccgtcgtaaagcgatgctgcaggatattgctatcctgactggcggtactgta
atctctgaagagattggtcttgagcttgaaaaagcgcaactggaagacctgggtacagcg
aagcgtgttgttatcaataaagataatacgactgttgttgacggtgcgggcgatgaccag
gcaatcgaaggtcgttgtgcacaaattaaaggtcaaatcgaagagtcttcttctgattat
gacaaagaaaaacttcaggaacgtctggccaagctgtctggcggtgttgcagtaatcaaa
gttggtgctgctacagaagttgaaatgaaagagaagaaagaccgcgttgaagatgcgctg
cacgcaactcgtgctgctgttgaagagggcgtggtgcctggtggtggtgttgcactggtt
cgtgccgcagctaaagtacttgagctgcaaggcgaaaacgaagaccagacacacggtatt
aacctggcgctacgcgctatggaagcaccacttcgtcaaatcgcaactaacgctggcgca
gaagcatcagtggttgtaaatgcggttaaaggcggcgaaggtaactacggttacaatgca
ggtaacgacacatacggcgatatgctggaaatgggtatccttgacccaactaaagtaacg
cgctctgcactgcagttcgcttcttcagtagccagcctgatgatcacgaccgaagcaatg
gtagctgagattcctaaagaagaaggcgctggtgctcctgatatgggtggcatgggcgga
atgggcggcatgggcggcatgatgtaa
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