Streptomyces noursei ZPM: SAZ_12350
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Entry
SAZ_12350 CDS
T03896
Name
(GenBank) DNA topoisomerase IV subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
sall
Streptomyces noursei ZPM
Brite
KEGG Orthology (KO) [BR:
sall00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sall03032
]
SAZ_12350
03400 DNA repair and recombination proteins [BR:
sall03400
]
SAZ_12350
Enzymes [BR:
sall01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
SAZ_12350
DNA replication proteins [BR:
sall03032
]
Prokaryotic type
DNA Topoisomerases
SAZ_12350
DNA repair and recombination proteins [BR:
sall03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
SAZ_12350
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-ProteinID:
AKA03127
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Position
2833213..2835657
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AA seq
814 aa
AA seq
DB search
MARRSTKTPPPDDFEERILDIDVVDEMQGSFLEYAYSVIYSRALPDARDGLKPVHRRILY
QMNEMGLRPERGYVKCARVVGEVMGKLHPHGDASIYDALVRMAQPFSMRLPLVDGHGNFG
SLGNDDPPAAMRYTECRMASATSLMTESIEEDTVDFTPNYDGQEQEPVALPAAYPNLLVN
GTSGIAVGMATNMPPHNLGEVIAAARHLIKHPNADLEALMRFVPGPDLPTGGRIVGLGGV
RDAYEKGRGTFKIRATVAVENVTARRKGLVVTELPFAVGPEKVISKIKDLVGTKKLQGIA
DVKDLTDREHGLRLVIEVKNGFHPEAVLEQLYKLTPMEESFGINNVALVDGQPLTLGLKE
LLEVYVDHRFNVVRRRSEFRRTKRRDRLHLVEGLLTALVDIDEVIRLIRSSENSAQAKER
LIDRFALSEVQTQYILDTPLRRLTKFDRIELEAERDRLESEIAELTRILESDAELRKLVS
GELAAVAKKYGTPRRTVLLESAGAPVAAVPLEVSDDPCRVLLSSTGLLARTTTAETAFDP
DARRARHDVIISAVPATARGEVGAVTSDGRLLRLSVIDLPQLPDTTTPNLSGGAPISEFL
SLQDGEQLVCLTTLDESSPGLALGTAQGVVKRVVPDYPSNKDELEVITLKDGDRIVGAAE
LRTGEEDLVFITDEAQLLRYPASQVRPQGRPAGGMAGIKLGQGAKVIAFAAVDPAVDGMV
FTVAGSHGTLDDSVATAKLTPFDQYPRKGRATGGVRCQRFLKGEDCLTMAWAGSAPVRAA
DAKGAAVELPEPDPRRDGSGMPLTTKVAALAGPV
NT seq
2445 nt
NT seq
+upstream
nt +downstream
nt
atggcccgccgcagcacgaagaccccgccgccggacgacttcgaggagaggatcctcgac
atcgacgtcgtcgacgagatgcagggatccttcctcgagtacgcgtactcggtcatctac
tcgcgcgccctgccggacgcccgcgacggtctcaagcccgtgcaccgccgcatcctctac
cagatgaacgagatgggcctgcggcccgagcgcgggtacgtgaagtgcgcccgggtcgtc
ggtgaggtgatgggcaagctccacccgcacggtgacgcgtcgatctacgacgccctggtc
cgcatggcgcagccgttctcgatgcggctgcccctggtggacgggcacggcaacttcggt
tccctgggcaacgacgacccgcccgccgcgatgcggtacaccgagtgccggatggcgtcg
gcgacgtccctgatgacggagtccatcgaagaggacaccgtcgacttcacgcccaactac
gacggccaggagcaggagccggtcgccctccccgccgcgtaccccaacctcctcgtcaac
gggacgtccggcatcgccgtcggcatggccacgaacatgccgccgcacaacctcggcgag
gtgatcgccgcagcccgccacctgatcaagcacccgaacgccgatctcgaagccctgatg
cgcttcgtgcccggtccggacctgccgacgggcggccggatcgtgggcctgggcggggtg
cgggacgcgtacgagaagggccgcggcacgttcaagatccgtgcgacggtcgcggtggag
aacgtcaccgcccgccgcaagggcctggtcgtcaccgaactccccttcgcggtcggcccg
gagaaggtcatctccaagatcaaggatctggtggggaccaagaagctccagggcatcgcg
gacgtgaaggacctcaccgaccgcgagcacggcctgcggctggtgatcgaggtcaagaac
ggcttccaccccgaggccgtgctggagcagctctacaagctcacgccgatggaagagtcc
ttcggcatcaacaacgtcgccctggtagacggccagccactgacgctgggcctcaaggag
ctgctggaggtctacgtcgaccaccgcttcaacgtggtgcgccgacgcagcgagttccgc
cgcaccaagcggcgcgaccggctccacctggtcgagggcctgctgaccgccctggtggac
atcgacgaggtcatccgcctgatccgctccagcgagaacagcgcccaggccaaggagcgc
ctgatcgaccgcttcgcgctgagcgaggtgcagacccagtacatcctcgacaccccgctg
cgccggttgaccaagttcgaccggatcgagttggaggccgagcgcgaccggctggagtcc
gagatcgcggaactgacccggatcctggagtcggacgccgaactgcgcaagctggtctcc
ggcgagctggcggcggtcgccaagaagtacggcacgccgcgccggacggtcctgctggag
tcggcgggggccccggtcgccgccgtaccgctggaggtctccgacgacccgtgccgggtg
ctgctgtcctccacggggttgctggcgcgcaccaccacggcggaaacggcgttcgacccc
gacgccaggcgcgccaggcacgatgtgatcatctcggcggtgccggcgaccgcacgcggt
gaggtcggcgcggtgacgtccgacgggcggctgctgcggctgtcggtgatcgacctgccg
cagcttccggacaccacgacgcccaacctctccggtggcgccccgatctcggagttcctg
agcctccaggacggcgaacagctggtgtgcctgacgaccctggacgagtcctcgccgggt
ctggccctcggtacggcacagggcgtcgtgaagcgagtggtgcccgactacccgtccaac
aaggacgagttggaggtcatcaccctcaaggacggcgaccgcatcgtgggcgcggcggag
ctgcgcaccggggaggaagacctggtcttcatcaccgacgaggcacagttgctgcgctac
ccggcgtcgcaggtccgaccgcagggccggccggcgggcgggatggcgggcatcaaactg
ggccagggcgctaaggtcatcgccttcgcggcggtcgatccggccgtggacggcatggtg
ttcacggtcgccgggtcgcacggcacgctggacgattcggtggccacggccaagctcacg
ccgttcgaccagtacccgcgcaagggcagagctaccggtggcgtgcgctgccagcggttc
ctcaagggcgaggactgcctgacgatggcctgggccggctcggcaccggtgcgcgccgcc
gacgccaagggcgcggctgtggaactgccggaaccggatccgcgccgggacggctccggc
atgccactgaccacgaaggtggcagcactggccggtcccgtgtaa
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