KEGG   Streptomyces noursei ZPM: SAZ_12705
Entry
SAZ_12705         CDS       T03896                                 
Name
(GenBank) DEAD/DEAH box helicase
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
sall  Streptomyces noursei ZPM
Brite
KEGG Orthology (KO) [BR:sall00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:sall03400]
    SAZ_12705
Enzymes [BR:sall01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     SAZ_12705
    5.6.2.6  RNA 3'-5' helicase
     SAZ_12705
DNA repair and recombination proteins [BR:sall03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    SAZ_12705
SSDB
Motif
Pfam: DEAD_assoc WHD_Lhr WHD_2nd_Lhr WHD_4th_Lhr DEAD WHD_3rd_Lhr Helicase_C ResIII DUF6406 AAA_25 PhoH AbiEi_4
Other DBs
NCBI-ProteinID: AKA03193
LinkDB
Position
2916638..2921395
AA seq 1585 aa
MTQSALDSFSPATRGWFAGAFRAPTAAQEGAWRAIAEGSDVLVVAPTGSGKTLAAFLASL
DALASSPPPAEPKKRCRVLYVSPLKALAVDVERNLRSPLTGIRQESVRRGLPEPDVRVGT
RSGDTPAAERRALATRPPDILITTPESLFLMLTSAAREALAGVETVIVDEVHAVAGTKRG
AHLALSLERLDELLDRPARRIGLSATVRPVEEVARYLSPRRRVEIVQPPSGKRFDLTVVV
PVEDMGELGSAPVQEGETGEKPSIWPQVEERIVDLVQAHRSTIVFANSRRLAERLCNRLN
EIAYERTTGTPLPEHHSPAELMAEAGAAKGAPALLARAHHGSVSKEQRAQVEEDLKAGRL
PAVVATSSLELGIDMGAVDLVVQVESPPSVASGLQRVGRAGHQVGAVSKGIVFPKYRGDL
VQAAVVTERMRAGAIEALRVPANPLDVLAQQVVAMAAMDTWDVEELLAVVRRAAPFAALP
ESAFTAVLDMLAGRYPSDAFAELRPRLVWDRVAQTVTGRPGAQRLAVTSGGTIPDRGLFG
VFLAGESSGKGGGGRRVGELDEEMVYESRVGDVFTLGTTSWRIDDITRDRVLVTPAPGVP
GRLPFWKGDQLGRPLELGRALGAFLREIGSLAPEDAGARMSAAGLDDWAVANVQGYLAEQ
RQSCGHVPDDRTIVVERFRDELGDWRVVIHSPFGAQVHAPWALALGARLTERYGLDAQVM
HADDGIVLRLPDADLMGLDFLDGEGDGGGSGAADRAELDPEQSPVGAADVVFDHGEVDQL
VTEQVGGSALFASRFRECAARALLLPRRSPGKRTPLWQQRQRAAQLLQVASEFGSFPIVL
EAVRECLQDVFDVPGLTELMADIEARRVRLVEVTTPEPSPFARSLLFGYVAQFLYEGDSP
LAERRAAALSLDSRLLAELLGRAELRELLDAEVLTELEAELQWRTEDRRVKDVEGVADLL
RLLGPLTDAELAERGAEPAWPAELAATRRAIRVRIAGTEHWAAVEDAGRLRDALGTALPV
GVPESFTEPVKDPLGDLLSRYARTHGPFTSEQAATRFGLGTAVTDGALQRLAAAGRLVQG
EFHPQGIGQEWCDAQVLRRLRRRSLAALREELEPVPPAALAAFLPQWQHVGAPRPAPSSG
APAPPAAGSSGLRGLDGLVRAVEQLQGAPVPASALEKLVLPSRVGGYAPALLDELTATGE
VLWAGAGALPGKDGWLSLHLADTAPLLLRPPLPLELSALHESVLRALAPGYGLFFRQIAD
QVRATTHPDATDPQLADALWELAWSGRLTNDTLAPLRALLGSGRTAGSTAHRARRAVPRG
RYGTLTAAARPTASRSGPPTVGGRWSLLPAPEPDPTHRAHALARTLLDRHGIVTRGAVAA
EGVTGGFSAAYRVLSAFEESGQARRGYVVEGLGAAQFAMDGAVDRLRAISTQRERGTDGP
FPDGGPARRGRGGGGPRALVLAAADPANAYGAALPWPEPPEGATHKPGRKAGSLVVLVDG
ELTLYLERGGKTLLMWPLGGDPAQAATDPRLHSAVEALVDGARAGAVGTLTTERINGTSA
LTSPYAPVLEAAGFHPTPRGMRLRG
NT seq 4758 nt   +upstreamnt  +downstreamnt
atgacccagtcagcgctcgactccttctcgcccgcgacccgcggctggttcgcgggggcg
ttccgtgcgcccaccgcggcgcaggagggcgcctggcgggccatcgccgaggggtcggac
gtcctggtggtcgcgccgacgggctccgggaagacgctggccgcgttcctggcgtcgctg
gacgccctggcgagcagcccgccgcccgccgagccgaagaagcgctgccgggtgctgtac
gtctcgccgctgaaggcactcgccgtcgacgtggagcgcaatctgcgcagtccgctgacg
ggcatccgtcaggagtcggtccgccgcgggctgccggagccggacgtccgggtcggcacc
cgctccggcgacaccccggccgccgagcgccgtgcgctggccacccgcccgccggacatc
ctcatcaccacgccggagtcgctgttcctgatgttgacgtccgcggcccgggaggcgctg
gccggcgtcgagacggtgatcgtggacgaggtgcacgcggtcgccggcaccaagcgcggc
gcccacctcgccctgtccctggagcggctggacgagctgctggaccgcccggcgcgccgg
atcgggctgtccgcgacggtccgcccggtggaggaggtggcccgctatctctcgccccgg
cgccgggtggagatcgtccagccgccgtccggcaagcggttcgacctcacggtggtcgtc
ccggtggaggacatgggcgagctcggcagcgcgcccgtccaggagggcgagacgggcgag
aagccctccatctggccccaggtcgaggagcggatcgtcgatctcgtccaggcgcaccgc
tccacgatcgtcttcgccaactcccgccgcctcgccgagcggctgtgcaaccgcctcaac
gagatcgcctacgagcgcaccacgggcacgccgctgcccgagcaccactcccccgccgag
ctgatggccgaggccggcgccgccaagggggcaccggccctgctggcccgcgcgcaccac
ggctcggtctccaaggagcagcgggcccaggtggaggaggacctcaaggccgggcggctg
ccggccgtggtcgccacgtccagtctggagctgggcatcgacatgggcgcggtcgacctg
gtcgtccaggtggagtcgccgccgtcggtcgcctccggactccagcgggtggggcgggcc
ggccaccaggtcggcgcggtctccaagggcatcgtcttccccaagtaccgcggcgatctg
gtgcaggcggcggtggtcaccgagcggatgcgcgcgggcgccatcgaggcgctgcgggtg
cccgccaatccgctggacgtgctggcccaacaggtcgtcgcgatggccgcgatggacacc
tgggacgtcgaggagctgctggccgtggtccgccgggcggccccgttcgccgcgctcccg
gagtccgcgttcaccgccgtactggacatgctcgccggccgctatccgtccgacgccttc
gccgagctgcgcccgcgcctggtctgggaccgcgtcgcgcagaccgtcaccggccgcccc
ggtgcccagcggctggccgtgacgtccggcggcaccatcccggaccgcggcctgttcggc
gtcttcctggccggcgagagctccggaaagggcggcggcggacgccgggtcggcgagctg
gacgaggagatggtctacgagtcccgcgtcggcgacgtcttcacgctcggcaccacgtcc
tggcgcatcgacgacatcacccgcgaccgggtcctggtcacccccgcccccggggtgccc
ggccggctgccgttctggaagggcgaccagctcggccgcccgctcgaactgggccgcgcg
ctgggcgcgttcctccgggagatcggctcgctcgcccccgaggacgccggcgcccggatg
tccgccgccggcctcgacgactgggcggtcgccaacgtccagggctacctcgccgagcag
cgccagtcctgcggccacgtcccggacgaccgcaccatcgtcgtcgagcgcttccgcgac
gagctgggcgactggcgggtcgtgatccactcccccttcggggcgcaggtgcacgccccg
tgggcgctggccctgggcgcccggctcaccgagcgctacggcctggacgcccaggtgatg
cacgccgacgacggcatcgtgctgcggctgccggacgccgacctgatgggcctggacttc
ctcgacggcgagggcgacggcggcggctccggtgcggccgaccgcgcggagctcgacccc
gagcagtccccggtcggcgccgccgacgtggtcttcgaccacggcgaggtcgaccagctc
gtcaccgaacaggtcggcggctcggcgctgttcgcctcccgcttccgggagtgcgcggcg
cgcgccctgttgctgccccgccgcagccccggcaagcgcaccccgctgtggcaacagcgc
cagcgcgcggcccagttgctccaggtggcgagcgagttcgggtcgttcccgatcgtcctg
gaggcggtccgcgaatgcctccaggacgtcttcgacgtgccggggctgacggagttgatg
gccgacatcgaggcccgccgggtgcgcctggtggaggtcacgacccccgagccgtccccg
ttcgcccgctcgctgctcttcggctacgtcgcccagttcctctacgagggcgactccccg
ctcgccgaacgccgcgccgccgcgctgtccctggactcccggctgctggccgagctgttg
ggccgggcggagctgcgcgagctgctggacgcggaggtcctgacggagctggaggccgag
ctccagtggcgcaccgaggaccgtcgcgtcaaggacgtcgagggcgtcgccgacctgctg
cgcctgttggggccgctgaccgacgccgagttggccgagcggggcgccgagccggcctgg
cccgcggagctggccgcgacccgccgcgccatccgggtgcggatcgccggcaccgagcac
tgggccgccgtcgaggacgccggccgcctccgggacgccctgggcaccgcgctcccggtc
ggcgtccccgagtcgttcaccgagccggtcaaggacccgctgggcgatctgctctcccgg
tacgcccgcacccacggcccgttcacgtccgagcaggcggccacccgcttcggcctgggc
accgccgtgaccgacggcgccctccagcgcctggccgccgccggccgcctcgtccagggc
gagttccacccccaggggatcggtcaggagtggtgcgacgcccaggtgctgcgccggctg
cgccgccgttcgctggccgcgctgcgcgaggagttggagccggtgccgcccgccgcgctg
gccgccttcctcccccagtggcagcacgtcggcgcgccgcggccggcgccctcctccggg
gcgcccgcgccgccggccgccggctcgtccgggctgcgcggcctcgacggcctggtccgc
gccgtcgagcagctccagggcgcgccggtgccggcctccgccctggagaagctggtcctg
ccgtcccgggtcggcggctacgccccggcgctgctggacgagctcaccgccaccggcgaa
gtgctgtgggccggcgcgggcgccctgcccggcaaggacggctggctctcgctccacctc
gccgacaccgcgcccctcctgctccggcccccgctgcccctggaactgtccgcgctgcac
gagtcggtgctgcgcgccctcgcccccggctacggcctgttcttccggcagatcgccgac
caggtccgggccaccacacatccggacgccaccgatccgcagctcgccgacgccctgtgg
gagctggcctggtcgggtcggctcaccaacgacaccctcgccccgctgcgtgccctgctc
ggctcgggccgcacggcgggctccacggcccaccgcgcccgccgcgccgtcccccggggg
aggtacggcacgctgaccgcggccgcccgccccaccgcgtcccgctcgggtccgccgacc
gtcggcggccgctggtccctgctccccgcgcccgagccggatccgacgcaccgcgcccac
gccctggcccgcacgctcctcgaccggcacggcatcgtcacccgcggcgcggtcgccgcc
gagggggtcaccgggggcttctccgccgcctaccgcgtgctgtccgccttcgaggagtcc
gggcaggcccgccgcggctacgtcgtcgagggactgggcgccgcgcagttcgccatggac
ggcgcggtggaccgcctccgggcgatcagcacccagcgggagcgcggcaccgacggcccg
ttcccggacggcggcccggcccggcgcgggcgcggcggcggggggccgcgcgccctggtc
ctcgccgcggccgacccggccaacgcgtacggcgccgcgctgccctggccggagccgccc
gagggcgccacccacaagccgggccgcaaggcgggctccctggtcgtcctggtcgacggc
gagctgacgctctacctggagcgcggcggcaagacgctcctgatgtggccactgggcggc
gacccggcccaggccgccaccgacccccgcctgcattccgccgtcgaggccctcgtcgac
ggggcccgggcgggcgccgtcggcaccctcaccaccgagcgcatcaacggcacctccgcc
ctcacctccccctacgcgcccgtcctggaggccgcgggcttccaccccacgccccgggga
atgcggctgcgcggctga

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