Streptomyces noursei ZPM: SAZ_20310
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Entry
SAZ_20310 CDS
T03896
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
sall
Streptomyces noursei ZPM
Pathway
sall03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
sall00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
SAZ_20310
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sall03021
]
SAZ_20310
03400 DNA repair and recombination proteins [BR:
sall03400
]
SAZ_20310
Enzymes [BR:
sall01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
SAZ_20310
Transcription machinery [BR:
sall03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
SAZ_20310
DNA repair and recombination proteins [BR:
sall03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
SAZ_20310
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Apocytochr_F_C
TarH
Motif
Other DBs
NCBI-ProteinID:
AKA04543
LinkDB
All DBs
Position
complement(4644305..4648204)
Genome browser
AA seq
1299 aa
AA seq
DB search
MLDVNFFDELRIGLATADDIRQWSHGEVKKPETINYRTLKPEKDGLFCEKIFGPTRDWEC
YCGKYKRVRFKGIICERCGVEVTRAKVRRERMGHIELAAPVTHIWYFKGVPSRLGYLLDL
APKDLEKVIYFAAYMITWVDEERRTRDLPSLEAHVSVERQQIEQRRDSDLEARAKKLETD
LAELEAEGAKADARRKVREGAEREMKQLRDRAQREIDRLDEVWSRFKNLKVQDLEGDELL
YRELRDRFGTYFDGSMGAAALQKRLETFDLDEEAERLREIIRTGKGQKKTRALKRLKVVS
AFLQTRNSPKGMVLDCIPVIPPDLRPMVQLDGGRFATSDLNDLYRRVINRNNRLKRLLDL
GAPEIIVNNEKRMLQEAVDALFDNGRRGRPVTGPGNRPLKSLSDMLKGKQGRFRQNLLGK
RVDYSARSVIVVGPQLKLHQCGLPKAMALELFKPFVMKRLVDLNHAQNIKSAKRMVERGR
TVVYDVLEEVIAEHPVLLNRAPTLHRLGIQAFEPQLVEGKAIQIHPLVCTAFNADFDGDQ
MAVHLPLSAEAQAEARILMLSSNNILKPADGRPVTMPTQDMVLGLFFLTTDEEEREVKGE
GRSFSSVSEAIMAFDARELSLQAKVDIRFPIGTVPPRGWTPPAPVEGEPEWQQGDSFRLR
TTLGRALFNELLPEDYPFVDYSVGKKQLSAIVNDLAERYPKVIVAATLDNLKASGFYWAT
RSGVTVAVSDIVVPEAKKAIVAGYEAQDEKVQKQYERGLITKDERTQELINIWTKATNEV
AEAMNENFPKTNPIFMMVDSGARGNMMQMRQIAGMRGLVSNAKNETIPRPIKASFREGLT
VLEYFISTHGARKGLADTALRTADSGYLTRRLVDVSQDVIIREEDCGTERGLKLRIGSKG
ADGILRKADDVESSVYARMLAEDVVVDGKVIAPANVDLGDVLIDQLIAHGVEEVKTRSVL
TCESAVGTCAFCYGRSLATGKLVDIGEAVGIIAAQSIGEPGTQLTMRTFHTGGVAGDDIT
LGLPRVVELFEARTPKGVAPISEAAGRVRIEETEKTKKVIVTPDDGSDETAYPVSKRARM
LVTEGDHVQVGQPLTVGAINPHDVLRILGQRAVQVHLVGEVQKVYNSQGVAIHDKHIEII
IRQMLRRVTIIESGDAELLPGELVERSKFEGENRRVVAEGGHPASGRPQLMGITKASLAT
ESWLSAASFQETTRVLTDAAINAKSDSLIGLKENVIIGKLIPAGTGLSRYRNIRVEPTEE
AKAAMYSAVGYDDIDYSPFGTGSGQAVPLEDYDYGPYNQ
NT seq
3900 nt
NT seq
+upstream
nt +downstream
nt
gtgctcgacgtcaacttcttcgatgagctccggatcggtctggccaccgctgacgacatc
cgtcagtggagccacggcgaggtcaagaagcccgagaccatcaactaccgcaccctgaag
cccgaaaaggacggactcttctgcgagaagatcttcggtccgacccgggactgggagtgc
tactgcggcaagtacaagcgcgtccgcttcaagggcatcatctgcgagcgctgtggcgtc
gaggtcacgcgcgccaaggtgcgtcgtgagcggatgggccacatcgagctggccgctccc
gtgacccacatctggtacttcaagggtgtgccgagccggctgggctacctgctggacctc
gcgcccaaggaccttgagaaggtcatctacttcgccgcctacatgatcacgtgggtggac
gaggagcgccgtacgcgcgacctgccctcgctggaggcgcacgtctccgtcgagcgccag
cagatcgagcagcgccgcgactccgacctggaggcccgcgccaagaagctcgagaccgac
ctggccgagcttgaggccgagggcgccaaggccgacgcgcgccgcaaggtgcgcgagggt
gccgagcgcgagatgaagcagctgcgcgaccgcgcgcagcgcgagatcgaccgtctcgac
gaggtctggagccgcttcaagaacctcaaggtccaggacctggagggcgacgagctcctc
taccgcgagctgcgtgaccgcttcggcacgtacttcgacggctccatgggcgccgccgcg
ctgcagaagcgcctggagaccttcgacctcgacgaggaggccgagcgcctccgcgagatc
atccggaccggcaagggccagaagaagacccgtgcgctcaagcgcctgaaggtcgtctcc
gccttcctgcagacccgcaacagccccaagggcatggtgctggactgcatcccggtcatc
ccgccggacctgcgtccgatggtgcagctggacggtggccgcttcgcgacctccgacctg
aacgacctgtaccgccgcgtcatcaaccgcaacaaccgtctgaagcggcttctcgacctc
ggcgcgcccgagatcatcgtgaacaacgagaagcgcatgctccaggaggccgtcgacgcg
ctcttcgacaacggccgtcgcggtcgcccggtgacgggccccggcaaccgtccgctgaag
tccctcagcgacatgctgaagggcaagcagggtcgattccgtcagaacctgctcggtaag
cgtgtggactactccgcgcgttccgtcatcgtcgtcggcccgcagctgaagctgcaccag
tgcggtctgcccaaggccatggcgctggagctcttcaagccgttcgtgatgaagcgcctg
gtggacctcaaccacgcgcagaacatcaagtcggcgaagcgcatggtcgagcgtggccgc
accgtggtgtacgacgtcctcgaagaggtcatcgccgagcacccggtgctgctgaaccgt
gcacccaccctgcaccgcctcggcatccaggccttcgagccgcagctggtcgagggcaag
gccatccagatccacccgctcgtctgcaccgcgttcaacgcggacttcgacggtgaccag
atggccgtccacctgccgctctccgcggaggcgcaggccgaggcccgcatcctgatgctg
tcctcgaacaacatcctcaagccggccgacggccgtccggtcaccatgccgacccaggac
atggtgctgggcctcttcttcctcaccacggacgaggaggagcgcgaggtcaagggtgag
ggccgctcgttctcctcggtctccgaggcgatcatggccttcgacgcccgcgagctctcg
ctccaggcgaaggtggacatccgcttcccgatcggcacggtgccgccgcgcggctggacc
ccgccggccccggtcgagggcgagccggagtggcagcagggcgacagcttccggctgcgg
acgaccctgggtcgcgcgctcttcaacgagctgctgcccgaggactacccgttcgtcgac
tactcggtgggcaagaagcagctctccgcgatcgtcaacgacctggccgagcgctacccg
aaggtcatcgtggcggcgacgctcgacaacctgaaggcgtccggcttctactgggccacc
cgttccggcgtcaccgtcgccgtctccgacatcgtcgtgccggaggccaagaaggcgatc
gtcgccggctacgaggcgcaggacgagaaggtccagaagcagtacgagcgcggtctgatc
accaaggacgagcgcacgcaggaactcatcaacatctggaccaaggcgaccaacgaggtt
gccgaggcgatgaatgagaacttcccgaagaccaaccccatcttcatgatggtggactcg
ggtgcgcgcggaaacatgatgcagatgcgtcagatcgcgggtatgcgtggtctggtgtcg
aacgccaagaacgagacgatcccgcgtccgatcaaggcgtcgttccgtgagggtctgacc
gtgctggagtacttcatctccacccacggtgcccgtaagggtctggccgacaccgccctg
cgtaccgccgactccggttacctcacccgtcgtctggtcgacgtctcccaggacgtcatc
attcgcgaggaggactgcggcaccgagcgcggcctgaagctgcggatcggttcgaagggc
gcggacggcatcctgcgcaaggcggacgacgtcgagtcctccgtgtacgcgcggatgctc
gccgaggacgtcgtggtcgacggcaaggtcatcgccccggccaacgtcgacctcggtgac
gtgctgatcgaccagctgatcgcgcacggcgtggaggaggtcaagacccgctcggtcctg
acctgtgagtccgcggtcggtacctgcgccttctgctacggccgttcgctggccaccggc
aagctggtcgacatcggtgaggcggtcggcatcatcgccgcccagtccatcggtgagccc
ggcacccagctgacgatgcgtaccttccacaccggtggtgtggccggtgacgacatcacc
ctgggtctgccgcgtgtcgtcgagctcttcgaggcccgtacgcccaagggcgtcgccccg
atctcggaggcggccggccgcgtccggatcgaggagaccgagaagaccaagaaggtcatc
gtcacgccggacgacggcagcgacgagacggcctacccggtctccaagcgtgctcgcatg
ctggtgaccgagggggaccacgtgcaggtcggccagccgctgaccgtcggtgcgatcaac
ccgcacgacgtgctgcggatcctgggtcagcgtgccgtccaggtccacctggtcggcgag
gtccagaaggtctacaacagccagggcgtggcgatccacgacaagcacatcgagatcatc
atccggcagatgctgcgccgcgtgacgatcatcgagtccggcgacgcggagctgctgccg
ggcgagctcgtggagcgctcgaagttcgagggcgagaaccgtcgcgtggtggcggaaggc
ggccacccggcctccggccgtccgcagctgatgggtatcaccaaggcttcgctggcgacg
gaatcctggctgtcggccgcctccttccaggagacgacccgagtgctgacggacgcggcg
atcaacgccaagtccgacagcctcatcggcctcaaggagaacgtcatcatcggtaagctc
atcccggccggtacgggcctgtcccgctaccgcaacatccgggtcgagcccaccgaggag
gccaaggccgcgatgtactcggccgtcggttacgacgacatcgactactcgcccttcggc
accggttccggccaggcggtcccgctggaggactacgactacggtccgtacaaccagtaa
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integrated database retrieval system
