Streptomyces noursei ZPM: SAZ_28580
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Entry
SAZ_28580 CDS
T03896
Name
(GenBank) RNA polymerase sigma factor
KO
K03090
RNA polymerase sigma-B factor
Organism
sall
Streptomyces noursei ZPM
Brite
KEGG Orthology (KO) [BR:
sall00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sall03021
]
SAZ_28580
Transcription machinery [BR:
sall03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
SAZ_28580
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r4_2
HTH_23
MarR_2
HTH_24
HTH_10
HTH_AsnC-type
DUF7343
NirdL-like_HTH
HTH_Crp_2
Sigma70_ECF
HTH_3
IF2_N
MarR
HTH_AraC
GerE
DinB_2
Zincin_1
Motif
Other DBs
NCBI-ProteinID:
AKA05960
LinkDB
All DBs
Position
complement(6455386..6456351)
Genome browser
AA seq
321 aa
AA seq
DB search
MAAGAVIPGQHAQPHPTGADDHGGRLDAAEQAERADHMDQSEQQGRQAERQDPPAAVDRP
QDRRSAEPADTHDRGGARAMFYELRKLPDGSPERAELRNTLVRMHLPLVEHLARRFRNRG
EPLDDLTQVATIGLIKSVDRFDPDRGVEFSTYATPTVVGEIKRHFRDKGWAVRVPRRLQE
LRLSLTTATAELSQRHGRAPTVHELAEHLGISEEEVLEGLESANAYSTLSLDVPDTDDES
PAVADTLGAEDEALEGVEYRESLKPLLEDLPPREKKILLLRFFGNMTQSQIAQEVGISQM
HVSRLLARTLAQLRDKLLVEE
NT seq
966 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgggcgcggtcatccccgggcagcatgcccagccgcacccgacgggagcggac
gaccacggcggccggttggacgcggcggagcaggcggagcgggcggaccacatggaccag
agcgagcagcagggccggcaggcggaacggcaggatccgccggctgccgtggaccggccc
caggaccggcgctccgcggagccggcggacacgcacgaccgcggcggcgcccgcgcgatg
ttctacgagctgcgcaagctccccgacggctccccggagcgcgccgagctgcgcaacacc
ctcgtgcggatgcacctgccgctggtcgagcacctggcccggcggttccgcaaccgcggt
gagccgctcgacgacctgacccaggtcgccacgatcggtctgatcaagtcggtggaccgg
ttcgacccggaccgcggcgtggagttctccacgtacgccacgcccaccgtcgtcggcgag
atcaagcggcacttccgcgacaaggggtgggcggtccgggtcccccggcgcctccaggag
ctgcggctgtcgctgaccaccgcgaccgccgagctctcccagcggcacggccgggcgccc
accgtgcacgagctggccgagcacctggggatctccgaggaggaggtcctggagggcctg
gagtcggcgaacgcctacagcaccctctccctcgacgtcccggacaccgacgacgagtcg
ccggccgtcgccgacaccctgggggccgaggacgaggcgctggaaggcgtggagtaccgc
gagtccctcaaaccgctgctggaggacctgccgccgcgcgagaagaagatcctgctgctg
cggttcttcgggaacatgacccagtcgcagatcgcccaggaggtcggcatctcccagatg
cacgtctcccgcctactggcccgcaccctggcccagctccgcgacaagctgctggtcgag
gagtaa
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