Streptomyces noursei ZPM: SAZ_31285
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Entry
SAZ_31285 CDS
T03896
Name
(GenBank) 3'-5' exonuclease
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
sall
Streptomyces noursei ZPM
Brite
KEGG Orthology (KO) [BR:
sall00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sall03016
]
SAZ_31285
Enzymes [BR:
sall01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
SAZ_31285
Transfer RNA biogenesis [BR:
sall03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
SAZ_31285
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Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
DNA_pol_A_exoN
HRDC
DUF3261
TBP-binding
Motif
Other DBs
NCBI-ProteinID:
AKA06437
LinkDB
All DBs
Position
complement(7157377..7158651)
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AA seq
424 aa
AA seq
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MTDAQKTAADTTLRAPGESPPDSRPAPVPLLEPREGIPPVTATGEALAEVVAAFAAGRGP
VAVDAERASGYRYGQRAYLVQLRREGAGSVLIDPVGCPSLAALGDVICDTEWVLHAATQD
LPCLRDIGMLPTKLFDTELAGRLAGFARVGLGAMVENVLGYALEKGHSAVDWSTRPLPDP
WLRYAALDVELLVDLRDALEEELDRQGKLEWARQEFAAIAAAPPAPPRKDPWRRTSGMHK
VRRRRQMAVVRELWTLRDQVAQRRDVSPGKVLGDAAIIEAALQLPPNTHALAGLSGFGHR
MGRRQLEQWQTAVDRARALPDSELPQPGQPLNGPPPPRSWADKDPAAAARLSAARAAVTT
LAEQLNLPQENLITPDTVRRVCWEPPTGATPETVAEVLAGHGARPWQIELVSPLLAEALQ
ANGS
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgacgcccaaaagaccgcagcagacacgacactgcgagcacccggagaatcgcct
ccggattcccgaccggcgccggtacccctactggaaccgcgcgagggcatccccccggtg
accgccaccggtgaggcactcgccgaggtcgtcgccgccttcgcggcgggccgcggcccg
gtcgcggtggacgccgagcgcgcctcgggctaccgctacggccagcgcgcctacctcgtc
cagctgcgccgcgagggcgccggcagcgtgttgatcgacccggtcggctgccccagcctc
gccgcactgggggacgtgatctgcgacaccgagtgggtgctgcacgccgcgacccaggac
ctcccgtgcctgcgcgacatagggatgctccccaccaagctgttcgacaccgagttggcc
gggcggctggccggtttcgcccgggtcggcctgggcgccatggtcgagaacgtcctcggc
tacgccctggagaaggggcactcggccgtcgactggtccacccgtccgctgcccgacccg
tggctgcgctacgccgcgctcgacgtcgagttgctggtggacctgcgcgacgccctggag
gaggagctggaccggcagggcaagctggagtgggcccgacaggagttcgcggccatcgcc
gccgctcccccggcaccgccccgcaaggacccctggcgccggacctccggcatgcacaag
gtgcgccggcgccggcagatggcggtcgtccgggagctgtggacgctgcgcgaccaggtc
gcccagcggcgcgacgtctcgcccggcaaggtgctcggcgacgccgcgatcatcgaggcg
gcgctccaactcccgcccaacacccatgcgctggccggcctgtccggcttcgggcaccgg
atgggccggcgacagttggagcagtggcagaccgccgtcgaccgcgcccgggcgctgccc
gacagcgagctgccgcagcccggccagccgctgaacggcccaccgccgccccgttcgtgg
gccgacaaggacccggccgccgcggcccgactgtcggccgcccgcgcggcggtgaccacg
ctcgccgagcagctgaacctgccgcaggagaacctcatcaccccggacacggtgcgccgg
gtgtgctgggagccgccgaccggtgcgaccccggagacggtcgccgaggtcctcgccgga
cacggcgcccgtccctggcagatcgagctggtctccccgctcctcgccgaggcccttcag
gccaacggctcctga
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