Salinimonas sediminis: D0Y50_02345
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Entry
D0Y50_02345 CDS
T05624
Symbol
rpoS
Name
(GenBank) RNA polymerase sigma factor RpoS
KO
K03087
RNA polymerase nonessential primary-like sigma factor
Organism
salm
Salinimonas sediminis
Brite
KEGG Orthology (KO) [BR:
salm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
salm03021
]
D0Y50_02345 (rpoS)
Transcription machinery [BR:
salm03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
D0Y50_02345 (rpoS)
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Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Motif
Other DBs
NCBI-ProteinID:
AXR05307
UniProt:
A0A346NIF0
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All DBs
Position
complement(506060..507052)
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AA seq
330 aa
AA seq
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MGQTKTAVIELKSRDEMDNIDTIDMKTEETLNEESNDDNDVFAVHEETHKNLDATQLYLG
EIGFSPLLTAEEEVYFARRALKGCEASRKRMIVSNLRLVVKIARRYNNRGLALLDLIEEG
NLGLIRAVEKFDPERGFRFSTYATWWIRQTIERAIMNQTRTIRLPIHVVKELNVYLRAAR
ELSQKLDHEPTAEEIAFALDKPVEDVTKMLRLNERITSVDTPIGGENDKALLDILTDHND
YGPEENLQDDDIKSNIVKWLEELNPKQREVLARRFGLLGYEPSTLEDVGAEIGLTRERVR
QIQVEALRRLRDMLSHQGLSLENMFDHMGE
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atgggacaaactaaaaccgcagttattgagttaaagtctcgcgatgaaatggacaatatc
gatactatcgatatgaaaactgaagaaaccttaaacgaggaatcgaacgacgataatgat
gttttcgccgttcatgaagaaacccacaaaaaccttgatgcgacccagctgtatttaggc
gaaattggtttctcccctctgctaaccgcagaagaagaagtgtattttgcacgccgtgca
ctaaaagggtgtgaagcatcccgtaagcgtatgatcgtaagcaatcttcgtctggttgtg
aagatagcccgccgttataataatcgtggcctggccttgctagacttgattgaagaaggc
aacttaggcttgattcgcgcggtagaaaagttcgaccctgaacgtggtttcagattctcg
acctatgccacctggtggattcgccagaccatagaacgggcgatcatgaaccagacccgc
accattcgcttacctatccatgttgttaaagaattaaatgtgtatttacgtgcagcccgt
gagttgtcgcagaaacttgatcacgagcctaccgcagaagaaattgcatttgcgttagat
aagcctgtagaagatgtcactaagatgcttcgtttgaacgagcgtattacttcagtggat
acccccattggtggggagaacgacaaagccttattggatattttgacagaccataatgac
tatggtcctgaagaaaatcttcaagatgatgatattaaatcaaacatcgttaaatggctt
gaagaacttaacccgaaacaacgtgaagttctggcgcgccgctttggtttattaggctac
gagcctagtacgctggaagatgtaggtgctgagattggtttaacccgcgagcgggttcgc
caaattcaggtagaagcattgcgcagactacgtgatatgttaagccatcagggcttatca
ttagaaaatatgttcgatcatatgggtgagtaa
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