Salinimonas sediminis: D0Y50_03145
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Entry
D0Y50_03145 CDS
T05624
Name
(GenBank) TRAM domain-containing protein
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
salm
Salinimonas sediminis
Brite
KEGG Orthology (KO) [BR:
salm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
salm03009
]
D0Y50_03145
Enzymes [BR:
salm01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
D0Y50_03145
Ribosome biogenesis [BR:
salm03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
D0Y50_03145
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
TRAM
Methyltransf_25
RrnaAD
Methyltransf_31
Methyltransf_11
TRM5-TYW2_MTfase
Methyltr_RsmB-F
Motif
Other DBs
NCBI-ProteinID:
AXR05450
UniProt:
A0A346NIU3
LinkDB
All DBs
Position
700664..702019
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AA seq
451 aa
AA seq
DB search
MVSFYKPARKTAAASTKAITPVTVDALDMNGVGVCRGHKPILFVEGALPGEQVKAKITSS
QKQMARASVKQVTQGSPYRRQPFCPVYQQCGGCQLQHADPDYALQERQQAMADYWRHQLK
LTDLPWQPPLTGPRPAYRRKARLAIDGRQPGQVRLGYRQQGSKNIVDIPQCPVLVSELQQ
LIKPLKTLLNAFANSRHLGHLHLLAGDNVVEVSINTSRDLSDAMLNAWQDFGVEHGCNVV
LEDSHGQQRLLHHHATLRCYTEDDLYLTPAPQDFVQVNRQVNQAMIAQAMHWLDPQPHDV
IADWFAGLGNFSLSLARRCAQVQAVEGVAAMVHKGQANAQEQGIASIDWCQLDLNDAAAV
QGALAVNFDKMVLDPSREGASTVCQALAGAPVEQVLYVSCNPSSFTRDAGYLLEAGYTVE
KIGLIEMFPYTRHLEVMALFTFQARPTKKAS
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
atggtcagtttctacaagccggcgagaaaaaccgccgccgcgtctaccaaagccattaca
ccggttacagtggatgccttagatatgaacggggtgggggtatgccgtgggcataagccg
atattgtttgttgaaggggcgttacccggcgaacaagtaaaggcaaagataacctctagc
caaaagcaaatggcccgcgcgtcggtcaagcaagtgacgcagggaagtccctaccgtcgc
caacctttttgtccggtctatcagcagtgtggtggatgtcagttacagcatgcagaccca
gactatgccttgcaggaacgccagcaagccatggccgactactggcgacaccagcttaag
ttaaccgatttaccgtggcagccacctttgactggcccgcggcccgcctatcggcgtaaa
gcccggctggcgattgacgggcgccaacccggccaagtgcgtctgggataccggcaacaa
ggtagtaaaaatattgtggacatcccccagtgtccggtattagtcagcgaattacagcag
cttattaaaccgctaaaaacgttgcttaacgcgtttgccaatagccggcatcttggtcac
ttgcatcttttagccggcgataacgtagttgaggtaagtattaataccagccgggatctc
agcgatgccatgttaaacgcctggcaagattttggtgttgaacatgggtgtaatgtggtg
cttgaagatagccacggccaacagcgcttattgcaccaccatgcaacgctacgctgctat
actgaagatgatttatacttaaccccggcaccgcaagattttgtgcaggttaatcgtcag
gttaaccaggcgatgatagctcaggcaatgcactggctggatccgcaaccccacgatgtg
atagccgactggtttgccggcctgggaaatttcagtttgtcactggctcgtcgttgcgcg
caggtgcaagccgtggagggggtggccgctatggtgcataaagggcaggcgaatgcacag
gaacagggcatcgcgtctatagactggtgtcaactggatttaaatgatgctgctgcagtg
cagggtgcactggcagttaattttgacaaaatggttttggatccctcccgcgagggcgct
tcaacagtatgtcaggcccttgcgggcgcgccggttgagcaggttttgtatgtttcttgc
aatccgagcagttttacccgcgatgccggctatttgttggaggccgggtataccgtcgaa
aaaataggattgatagaaatgttcccctacacccgacatctggaagtcatggcgttattc
acgttccaggcacgacccaccaaaaaagcgagttga
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