Salinimonas sediminis: D0Y50_04085
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Entry
D0Y50_04085 CDS
T05624
Name
(GenBank) AAA family ATPase
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
salm
Salinimonas sediminis
Pathway
salm03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
salm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
D0Y50_04085
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
salm03400
]
D0Y50_04085
Enzymes [BR:
salm01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
D0Y50_04085
DNA repair and recombination proteins [BR:
salm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
D0Y50_04085
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_30
AAA_19
HHH_RecD2
Viral_helicase1
UvrD_C_2
SH3_13
AAA_22
AAA_11
TraI_hel_assoc_N
PIF1
Helicase_RecD
AAA_16
PhoH
UvrD-helicase
AAA_14
AAA
nSTAND3
SLFN-g3_helicase
RsgA_GTPase
T2SSE
NACHT
AAA_28
NTPase_1
TrwB_AAD_bind
NPHP3_N
Motif
Other DBs
NCBI-ProteinID:
AXR05622
UniProt:
A0A346NJB5
LinkDB
All DBs
Position
complement(906553..908745)
Genome browser
AA seq
730 aa
AA seq
DB search
MNAQAPIVQQAVAQLHQDQMRVTSIPYTSTNMVIFSGVPLAKNSYKTNSGKYYVTIKADP
DTIPAQPALGQHWSVKGTRLVEEMETGDFVMQQHTYESPEHIECSLPETGEQLIRFIARE
VDFKGIGESKARALWELLGKDFHSIVRKDTPESREWLRSVLSEGSINALFEGYVKYKNLA
YCNWMTEHKIPASVQQRLLKHHGEESIEAIKQNPYVLIGFGMSFKDVDKLVEFDQFKITK
SDHRRLSSALETSIRKEIEKGHTYTTQASLRPYLTKLLNDKELVIQAFKAGHDRAQYILN
PVTGTYHPTAQLLMENVVAKRLKVLANQDNLFDEYANSAYCFAVDELPYKLTKKQIEAVT
TCLDNAVSCITGGAGTGKTTVLRTALRAYQQMGFEIHAVALSGRAAMRLHESIGLFTSTI
AKLLREDPIEPSSEQPKHLLVIDEASMIDLPTMYRLVNHIHPSVRIIFTGDPDQLPPIGC
GKVLADIVLSKAIANTMLDIVKRQDGSTGIPEYSKLINQGIVPEKLSTGAIHFHETTKNN
IAQVCCDLYQQSPENSRVMAPTKALVADINKLTQEAVNLNRNRLEFEMHGERFFQNLRLN
DAILFTQNHYDKGIQNGSLGVLTSVESSSENYGEVTLDTGDKVEITQSVLDCMELGYAIT
LHKAQGSQFPRIIIALRSGKIVDRAWLYTAITRAEAEIHIVGSRQDFELAVISESNSNKR
HSFLSEMLRS
NT seq
2193 nt
NT seq
+upstream
nt +downstream
nt
atgaatgctcaagctccaattgtgcaacaagctgttgcccaattacatcaagaccaaatg
cgcgttaccagcatcccttacacctcaaccaatatggtgatattcagtggtgtgccactg
gcaaaaaactcatacaaaaccaacagcggtaagtattacgtcaccattaaagctgacccc
gataccatccctgcacaaccagctctggggcagcattggtcagttaaaggcactcgttta
gtagaggaaatggaaacgggtgatttcgtgatgcaacaacatacctacgaatctcctgag
catatcgaatgcagccttccagagacgggcgagcaattgattcgctttatcgccagagag
gttgacttcaaaggtatcggcgaaagtaaagccagggcgctctgggagctacttggtaag
gattttcactcgatagttagaaaagatactcctgaatcaagagagtggcttagaagcgtc
ctgagtgaaggttctataaacgcgctatttgaaggttacgtcaaatataaaaatctggcc
tactgtaactggatgaccgagcacaagataccagcaagtgttcagcaacgtttattaaag
catcatggagaagaatccattgaggccataaaacaaaacccctacgtcctaattggcttt
ggtatgtcatttaaggatgtcgataaactggtcgaattcgaccagtttaagatcacaaaa
agtgatcatcgcagattaagctcggcacttgaaacttctattcgaaaagaaatcgaaaaa
ggtcacacttatacaacacaggcaagtttgcgaccctatttaactaaactgttaaacgat
aaggagcttgtgatccaagcgttcaaagcaggtcacgatagagcgcaatacatccttaat
cctgtcactggcacctatcatccaacggcacagttgctcatggaaaatgtcgttgcaaaa
cgacttaaagtattagctaatcaagacaatctttttgacgaatatgcaaattctgcatat
tgctttgcggttgatgaattgccatacaagctaaccaagaaacagattgaagcagtaaca
acatgtttagataatgcagtgagttgcatcactggcggggctggaacaggcaaaacaacg
gtacttagaacagctcttcgtgcttatcaacaaatgggatttgaaatacatgcagtggcg
ttgagtggtagagccgctatgcgcttgcacgaatcgatcggattattcacctcaactatt
gctaagttgttgcgtgaagatcctatcgagccaagttcagaacaaccaaagcacctttta
gtaattgatgaagccagtatgatcgacttaccaactatgtatcgcttggtcaaccatatt
catccatcggttcgcattatctttactggcgatccagaccagttaccaccgataggttgc
ggcaaggtgcttgctgatatcgttctgtcaaaagctattgccaacaccatgctagatatc
gttaaacgtcaggacggctcaacgggaattcccgaatactctaagctcattaatcaaggc
atcgtgcctgaaaagctaagtacgggcgctattcatttccacgaaacgacaaagaacaat
attgctcaagtctgttgcgacttgtatcagcaatcacctgaaaacagtcgtgttatggca
ccgaccaaagcgctcgttgctgacattaataaactaacacaagaagccgtcaaccttaat
cgaaatagacttgagttcgaaatgcacggtgagagattctttcaaaacctcagattgaat
gatgcgattctatttacgcaaaaccactacgacaaaggcattcaaaatggctcccttggt
gtactaaccagcgttgaatcatcaagtgaaaattatggtgaagtaacgttagatacgggt
gataaggttgagatcacacagtctgttctcgattgcatggagctaggttatgcaatcact
cttcacaaagcacaagggtctcaattcccgaggattatcattgctctgcgaagcggcaag
atcgtagacagagcgtggctctacaccgcaatcaccagagccgaagcggaaatccacatt
gttggctctcgacaagacttcgaacttgcagtgataagcgagagtaattcgaacaagcga
catagttttttatctgaaatgctgaggtcttaa
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