Salinimonas sediminis: D0Y50_04810
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Entry
D0Y50_04810 CDS
T05624
Name
(GenBank) RNA polymerase sigma factor FliA
KO
K02405
RNA polymerase sigma factor FliA
Organism
salm
Salinimonas sediminis
Pathway
salm02020
Two-component system
salm02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
salm00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
D0Y50_04810
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
D0Y50_04810
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
salm03021
]
D0Y50_04810
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
salm02035
]
D0Y50_04810
Transcription machinery [BR:
salm03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
D0Y50_04810
Bacterial motility proteins [BR:
salm02035
]
Flagellar system
Flagellar assembly proteins
Stator
D0Y50_04810
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r4_2
Sigma70_r3
HTH_23
UPF0122
GerE
HTH_38
CT_C_D
Motif
Other DBs
NCBI-ProteinID:
AXR05758
UniProt:
A0A346NJQ1
LinkDB
All DBs
Position
1060152..1060880
Genome browser
AA seq
242 aa
AA seq
DB search
MNSKAAAYRQQNDKAQLVERHASLVKRIAHHLMARLPASVLVDDLIQAGMIGLLEAAKNF
DGSKGASFETFAGIRIRGAMLDEIRKGDWTPRSVHKNSRAITEAIAQVEKDTGRDARDVQ
IAAKLNVSLDDYHQMLNEVNAGKLVGIEDLGVSEDVITTEGNQGNDSPLEDLMQGAFQKA
LAHAITTLPEREAIVLSLYYDEELNLREIGEVLDVSESRVSQIHSQAMLKLKAKMQTWRA
DS
NT seq
729 nt
NT seq
+upstream
nt +downstream
nt
ttgaatagcaaagcggctgcctaccgacagcaaaatgacaaagcacagttggtagagcga
cacgcgtccctggttaagcggatagcccatcacttaatggcccgcttaccagcgagcgta
ttggtggacgatcttatacaggcaggcatgattggcctgttggaagcggccaaaaatttc
gatggctcgaaaggagccagtttcgaaacgtttgcgggtattcgtatccgtggtgccatg
ctcgacgaaatacgtaaaggcgactggacaccccggtcggtgcacaaaaacagccgggcg
atcactgaagccattgctcaggttgaaaaagatacaggacgtgacgcgcgcgatgtgcag
atagctgctaagctcaatgtcagtcttgatgattaccaccaaatgctcaacgaagtgaac
gcaggcaaactggtgggtatagaagatctcggtgtgtcagaagatgtgattaccaccgaa
ggtaatcagggtaatgattcgccactggaagatttaatgcagggcgcgtttcaaaaagcg
ttagcccatgcaatcacgaccttaccggagcgcgaagccattgttctttcactgtattac
gatgaagaacttaacctgcgggaaattggcgaagtattggatgtcagtgaatcaagggtc
agtcagattcatagtcaggcgatgttgaaattaaaagctaaaatgcagacctggcgtgcc
gatagttaa
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