Salinimonas sediminis: D0Y50_05265
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Entry
D0Y50_05265 CDS
T05624
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
salm
Salinimonas sediminis
Pathway
salm03030
DNA replication
salm03430
Mismatch repair
salm03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
salm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
D0Y50_05265
03430 Mismatch repair
D0Y50_05265
03440 Homologous recombination
D0Y50_05265
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
salm03032
]
D0Y50_05265
03400 DNA repair and recombination proteins [BR:
salm03400
]
D0Y50_05265
Enzymes [BR:
salm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
D0Y50_05265
DNA replication proteins [BR:
salm03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
D0Y50_05265
DNA repair and recombination proteins [BR:
salm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
D0Y50_05265
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_T
Motif
Other DBs
NCBI-ProteinID:
AXR05837
UniProt:
A0A346NJY0
LinkDB
All DBs
Position
1162229..1162945
Genome browser
AA seq
238 aa
AA seq
DB search
MSQGLLSRFHPLHRMEKQRSRALQEGTVPALAKPLFEAALPSPDCLLSEVQCVVLDFETS
GLDCPNDAILSVGMLNLNYPILSLGSAQHYYVKAGHSVVADTAVINHIVPETLMGGMPPE
QVAGLLVDALQGKVVIAHGAWIEKQFLHALLGLDDNTSLPLVFLDTLAIERSMMVNTGMV
RPDLRLASIRENRSLPPYLAHNAFADAVATGELLLAQVADIFGLKPPVLGPLVRRSAN
NT seq
717 nt
NT seq
+upstream
nt +downstream
nt
atgagccaagggttgctgtcacgttttcatcctttacaccgaatggaaaaacagcgctcc
cgggctctgcaagaaggcactgtgccagcgttggcaaagcccctgtttgaagccgcctta
ccctcgccggactgcttattaagtgaggtgcaatgtgttgtgctggactttgaaacctct
ggcctggattgtcctaacgatgccattttgtcggtaggaatgctcaaccttaattatccg
atattatcattaggcagtgcccagcattattatgttaaggcgggccacagtgtggtggcc
gataccgcggtaataaaccatattgtacctgagactctgatgggcggtatgccgcctgaa
caggtcgccgggttattggttgacgcgttgcaggggaaagtggttattgcccatggggcc
tggattgaaaaacagtttttacacgccttgttagggctggacgacaataccagtctgccg
ctggtgtttttagataccctggccatagagcgcagcatgatggtcaataccggtatggtt
cggcctgatttacggctggccagtatccgggagaaccgcagcctgcccccttacctggca
cataacgcctttgccgatgcagtcgctaccggtgaattactgctggcgcaggtggccgat
attttcgggttgaagccacccgtattagggcccttggtgcgccgctctgctaactga
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